Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 AC073195.1-201ENST00000607241 877 ntBASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 TEX21P-204ENST00000641479 1693 ntBASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 RPS2P4-201ENST00000476944 856 ntBASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
UBQLN4Q9NRR5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 KRT16P1-201ENST00000399124 1418 ntBASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN4Q9NRR5 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.66■□□□□ 0.42
UBQLN4Q9NRR5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms