Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 AC105036.2-201ENST00000569468 176 ntBASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 RAP2CP1-201ENST00000605103 478 ntBASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 AP006587.1-201ENST00000534129 1502 ntBASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 YBX1P10-201ENST00000444752 975 ntBASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 NME6-213ENST00000451657 871 ntTSL 2 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 AC005082.1-201ENST00000413042 2259 ntBASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 AC007613.1-201ENST00000572811 2597 ntBASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42SE2Q9NRR3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms