Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GCM1Q9NP62 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GCM1Q9NP62 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
GCM1Q9NP62 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.43■□□□□ 0.22
GCM1Q9NP62 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GCM1Q9NP62 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GCM1Q9NP62 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GCM1Q9NP62 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
GCM1Q9NP62 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GCM1Q9NP62 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GCM1Q9NP62 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GCM1Q9NP62 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GCM1Q9NP62 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.43■□□□□ 0.22
GCM1Q9NP62 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.43■□□□□ 0.22
GCM1Q9NP62 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.43■□□□□ 0.22
GCM1Q9NP62 KSR1P1-201ENST00000446298 240 ntBASIC16.43■□□□□ 0.22
GCM1Q9NP62 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GCM1Q9NP62 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.43■□□□□ 0.22
GCM1Q9NP62 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.43■□□□□ 0.22
GCM1Q9NP62 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
GCM1Q9NP62 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GCM1Q9NP62 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GCM1Q9NP62 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.43■□□□□ 0.22
GCM1Q9NP62 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GCM1Q9NP62 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
GCM1Q9NP62 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
GCM1Q9NP62 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GCM1Q9NP62 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GCM1Q9NP62 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GCM1Q9NP62 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GCM1Q9NP62 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.42■□□□□ 0.22
GCM1Q9NP62 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GCM1Q9NP62 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GCM1Q9NP62 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
GCM1Q9NP62 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.42■□□□□ 0.22
GCM1Q9NP62 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GCM1Q9NP62 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GCM1Q9NP62 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GCM1Q9NP62 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
GCM1Q9NP62 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
GCM1Q9NP62 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GCM1Q9NP62 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GCM1Q9NP62 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GCM1Q9NP62 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.42■□□□□ 0.22
GCM1Q9NP62 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.42■□□□□ 0.22
GCM1Q9NP62 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.42■□□□□ 0.22
GCM1Q9NP62 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.42■□□□□ 0.22
GCM1Q9NP62 CD177P1-201ENST00000606252 935 ntBASIC16.42■□□□□ 0.22
GCM1Q9NP62 AC113410.3-201ENST00000623366 203 ntBASIC16.42■□□□□ 0.22
GCM1Q9NP62 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.42■□□□□ 0.22
GCM1Q9NP62 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
GCM1Q9NP62 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
GCM1Q9NP62 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.42■□□□□ 0.22
GCM1Q9NP62 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GCM1Q9NP62 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GCM1Q9NP62 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.42■□□□□ 0.22
GCM1Q9NP62 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
GCM1Q9NP62 TREX1-205ENST00000625293 1783 ntBASIC16.41■□□□□ 0.22
GCM1Q9NP62 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.41■□□□□ 0.22
GCM1Q9NP62 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCM1Q9NP62 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
GCM1Q9NP62 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GCM1Q9NP62 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.41■□□□□ 0.22
GCM1Q9NP62 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCM1Q9NP62 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCM1Q9NP62 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
GCM1Q9NP62 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
GCM1Q9NP62 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
GCM1Q9NP62 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCM1Q9NP62 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.41■□□□□ 0.22
GCM1Q9NP62 AL445675.2-201ENST00000620291 557 ntBASIC16.41■□□□□ 0.22
GCM1Q9NP62 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.41■□□□□ 0.22
GCM1Q9NP62 HLA-A-209ENST00000638375 975 ntBASIC16.41■□□□□ 0.22
GCM1Q9NP62 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
GCM1Q9NP62 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
GCM1Q9NP62 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
GCM1Q9NP62 KRT16P1-201ENST00000399124 1418 ntBASIC16.41■□□□□ 0.22
GCM1Q9NP62 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCM1Q9NP62 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCM1Q9NP62 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.41■□□□□ 0.22
GCM1Q9NP62 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCM1Q9NP62 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCM1Q9NP62 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
GCM1Q9NP62 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCM1Q9NP62 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GCM1Q9NP62 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCM1Q9NP62 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
GCM1Q9NP62 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GCM1Q9NP62 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
GCM1Q9NP62 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GCM1Q9NP62 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GCM1Q9NP62 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.4■□□□□ 0.22
GCM1Q9NP62 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GCM1Q9NP62 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
GCM1Q9NP62 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GCM1Q9NP62 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.4■□□□□ 0.22
GCM1Q9NP62 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GCM1Q9NP62 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GCM1Q9NP62 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.4■□□□□ 0.22
GCM1Q9NP62 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms