Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
VCX3AQ9NNX9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
VCX3AQ9NNX9 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
VCX3AQ9NNX9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.95■□□□□ 0.46
VCX3AQ9NNX9 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCX3AQ9NNX9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.95■□□□□ 0.46
VCX3AQ9NNX9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCX3AQ9NNX9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
VCX3AQ9NNX9 AC053503.5-201ENST00000601508 636 ntBASIC17.95■□□□□ 0.46
VCX3AQ9NNX9 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
VCX3AQ9NNX9 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.95■□□□□ 0.46
VCX3AQ9NNX9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VCX3AQ9NNX9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCX3AQ9NNX9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
VCX3AQ9NNX9 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCX3AQ9NNX9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.95■□□□□ 0.46
VCX3AQ9NNX9 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
VCX3AQ9NNX9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCX3AQ9NNX9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VCX3AQ9NNX9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VCX3AQ9NNX9 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3AQ9NNX9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.94■□□□□ 0.46
VCX3AQ9NNX9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3AQ9NNX9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3AQ9NNX9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3AQ9NNX9 ABALON-201ENST00000629058 1903 ntBASIC17.94■□□□□ 0.46
VCX3AQ9NNX9 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3AQ9NNX9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.94■□□□□ 0.46
VCX3AQ9NNX9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3AQ9NNX9 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3AQ9NNX9 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.94■□□□□ 0.46
VCX3AQ9NNX9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.94■□□□□ 0.46
VCX3AQ9NNX9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3AQ9NNX9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3AQ9NNX9 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
VCX3AQ9NNX9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.94■□□□□ 0.46
VCX3AQ9NNX9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3AQ9NNX9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
VCX3AQ9NNX9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3AQ9NNX9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCX3AQ9NNX9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
VCX3AQ9NNX9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
VCX3AQ9NNX9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.94■□□□□ 0.46
VCX3AQ9NNX9 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 AC008894.3-201ENST00000624324 3103 ntBASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3AQ9NNX9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 SLC47A1P1-202ENST00000449666 945 ntBASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 AC005224.4-201ENST00000583262 1652 ntBASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3AQ9NNX9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms