Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC40Q9H9A6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
LRRC40Q9H9A6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC40Q9H9A6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC40Q9H9A6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC40Q9H9A6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC40Q9H9A6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.52■□□□□ 0.72
LRRC40Q9H9A6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.52■□□□□ 0.72
LRRC40Q9H9A6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC40Q9H9A6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC40Q9H9A6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
LRRC40Q9H9A6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.52■□□□□ 0.72
LRRC40Q9H9A6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.52■□□□□ 0.72
LRRC40Q9H9A6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
LRRC40Q9H9A6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC40Q9H9A6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
LRRC40Q9H9A6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.52■□□□□ 0.72
LRRC40Q9H9A6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.52■□□□□ 0.72
LRRC40Q9H9A6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.52■□□□□ 0.71
LRRC40Q9H9A6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
LRRC40Q9H9A6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRRC40Q9H9A6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 KRASP1-201ENST00000407852 552 ntBASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.51■□□□□ 0.71
LRRC40Q9H9A6 AC093503.3-201ENST00000624917 2352 ntBASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 CD99P1-205ENST00000527459 561 ntBASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 HLA-A-209ENST00000638375 975 ntBASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
LRRC40Q9H9A6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 KRT16P5-201ENST00000455284 522 ntBASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 AC133681.1-201ENST00000465482 601 ntBASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 AC006058.3-201ENST00000606217 1069 ntBASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 AC073648.6-201ENST00000641589 218 ntBASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms