Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.77■□□□□ 0.43
POLR2J3Q9H1A7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
POLR2J3Q9H1A7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 AC092368.3-202ENST00000574180 1591 ntBASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 NCF1B-203ENST00000435988 1254 ntBASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 GUSBP6-202ENST00000438529 1198 ntBASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 AC060766.5-201ENST00000590539 871 ntBASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
POLR2J3Q9H1A7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 AC006333.2-201ENST00000607957 2099 ntBASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 TEX21P-204ENST00000641479 1693 ntBASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 TSPY6P-201ENST00000448518 926 ntBASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2J3Q9H1A7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 AL121829.2-201ENST00000620908 328 ntBASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms