Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL13Q99616 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
CCL13Q99616 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL13Q99616 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCL13Q99616 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL13Q99616 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL13Q99616 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL13Q99616 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CCL13Q99616 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
CCL13Q99616 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL13Q99616 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.11■□□□□ 0.17
CCL13Q99616 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL13Q99616 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.11■□□□□ 0.17
CCL13Q99616 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL13Q99616 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL13Q99616 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL13Q99616 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CCL13Q99616 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL13Q99616 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CCL13Q99616 AC004980.1-204ENST00000429707 299 ntBASIC16.11■□□□□ 0.17
CCL13Q99616 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.11■□□□□ 0.17
CCL13Q99616 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL13Q99616 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL13Q99616 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.11■□□□□ 0.17
CCL13Q99616 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.11■□□□□ 0.17
CCL13Q99616 AL031985.4-201ENST00000642138 673 ntBASIC16.11■□□□□ 0.17
CCL13Q99616 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CCL13Q99616 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CCL13Q99616 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL13Q99616 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.11■□□□□ 0.17
CCL13Q99616 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL13Q99616 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.11■□□□□ 0.17
CCL13Q99616 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL13Q99616 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL13Q99616 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL13Q99616 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.1■□□□□ 0.17
CCL13Q99616 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.1■□□□□ 0.17
CCL13Q99616 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL13Q99616 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL13Q99616 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CCL13Q99616 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.1■□□□□ 0.17
CCL13Q99616 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.1■□□□□ 0.17
CCL13Q99616 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL13Q99616 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CCL13Q99616 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CCL13Q99616 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL13Q99616 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.1■□□□□ 0.17
CCL13Q99616 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.1■□□□□ 0.17
CCL13Q99616 TSPY7P-201ENST00000431358 1114 ntBASIC16.1■□□□□ 0.17
CCL13Q99616 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL13Q99616 SNORA78-201ENST00000459373 127 ntBASIC16.1■□□□□ 0.17
CCL13Q99616 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.1■□□□□ 0.17
CCL13Q99616 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCL13Q99616 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.1■□□□□ 0.17
CCL13Q99616 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.1■□□□□ 0.17
CCL13Q99616 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.1■□□□□ 0.17
CCL13Q99616 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.1■□□□□ 0.17
CCL13Q99616 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL13Q99616 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCL13Q99616 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.1■□□□□ 0.17
CCL13Q99616 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.1■□□□□ 0.17
CCL13Q99616 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL13Q99616 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.1■□□□□ 0.17
CCL13Q99616 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL13Q99616 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL13Q99616 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCL13Q99616 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CCL13Q99616 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.1■□□□□ 0.17
CCL13Q99616 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCL13Q99616 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCL13Q99616 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL13Q99616 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL13Q99616 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL13Q99616 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL13Q99616 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CCL13Q99616 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
CCL13Q99616 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL13Q99616 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL13Q99616 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL13Q99616 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL13Q99616 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CCL13Q99616 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL13Q99616 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL13Q99616 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL13Q99616 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CCL13Q99616 AL355355.2-201ENST00000442321 338 ntBASIC16.09■□□□□ 0.17
CCL13Q99616 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL13Q99616 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCL13Q99616 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CCL13Q99616 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.09■□□□□ 0.17
CCL13Q99616 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL13Q99616 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCL13Q99616 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCL13Q99616 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL13Q99616 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.09■□□□□ 0.17
CCL13Q99616 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL13Q99616 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL13Q99616 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCL13Q99616 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CCL13Q99616 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms