Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PKP4Q99569 RPS2P55-201ENST00000397318 883 ntBASIC18.72■□□□□ 0.59
PKP4Q99569 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.72■□□□□ 0.59
PKP4Q99569 AC004980.1-204ENST00000429707 299 ntBASIC18.72■□□□□ 0.59
PKP4Q99569 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.72■□□□□ 0.59
PKP4Q99569 AC107956.1-201ENST00000494359 873 ntBASIC18.72■□□□□ 0.59
PKP4Q99569 AC131212.4-201ENST00000623606 975 ntBASIC18.72■□□□□ 0.59
PKP4Q99569 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PKP4Q99569 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PKP4Q99569 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PKP4Q99569 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PKP4Q99569 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PKP4Q99569 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.72■□□□□ 0.59
PKP4Q99569 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.72■□□□□ 0.59
PKP4Q99569 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PKP4Q99569 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PKP4Q99569 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PKP4Q99569 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.71■□□□□ 0.59
PKP4Q99569 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PKP4Q99569 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PKP4Q99569 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.71■□□□□ 0.59
PKP4Q99569 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PKP4Q99569 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.71■□□□□ 0.59
PKP4Q99569 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PKP4Q99569 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PKP4Q99569 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PKP4Q99569 Z85996.1-201ENST00000494644 937 ntBASIC18.71■□□□□ 0.59
PKP4Q99569 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PKP4Q99569 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.71■□□□□ 0.59
PKP4Q99569 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.71■□□□□ 0.59
PKP4Q99569 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.71■□□□□ 0.59
PKP4Q99569 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.71■□□□□ 0.59
PKP4Q99569 Z99916.2-201ENST00000604037 246 ntBASIC18.71■□□□□ 0.59
PKP4Q99569 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.71■□□□□ 0.59
PKP4Q99569 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PKP4Q99569 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.71■□□□□ 0.59
PKP4Q99569 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PKP4Q99569 KRT16P1-201ENST00000399124 1418 ntBASIC18.71■□□□□ 0.59
PKP4Q99569 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.71■□□□□ 0.59
PKP4Q99569 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.71■□□□□ 0.59
PKP4Q99569 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PKP4Q99569 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
PKP4Q99569 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PKP4Q99569 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PKP4Q99569 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PKP4Q99569 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PKP4Q99569 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PKP4Q99569 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PKP4Q99569 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PKP4Q99569 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PKP4Q99569 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
PKP4Q99569 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PKP4Q99569 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PKP4Q99569 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PKP4Q99569 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.7■□□□□ 0.58
PKP4Q99569 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PKP4Q99569 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PKP4Q99569 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PKP4Q99569 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PKP4Q99569 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.7■□□□□ 0.58
PKP4Q99569 FAM197Y1-201ENST00000421178 764 ntBASIC18.7■□□□□ 0.58
PKP4Q99569 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.7■□□□□ 0.58
PKP4Q99569 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.7■□□□□ 0.58
PKP4Q99569 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PKP4Q99569 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.7■□□□□ 0.58
PKP4Q99569 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.7■□□□□ 0.58
PKP4Q99569 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.7■□□□□ 0.58
PKP4Q99569 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PKP4Q99569 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PKP4Q99569 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.7■□□□□ 0.58
PKP4Q99569 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PKP4Q99569 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PKP4Q99569 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PKP4Q99569 AC141586.3-201ENST00000562166 1838 ntBASIC18.7■□□□□ 0.58
PKP4Q99569 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PKP4Q99569 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.69■□□□□ 0.58
PKP4Q99569 KRT8P41-201ENST00000533985 1514 ntBASIC18.69■□□□□ 0.58
PKP4Q99569 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PKP4Q99569 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PKP4Q99569 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PKP4Q99569 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
PKP4Q99569 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PKP4Q99569 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PKP4Q99569 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PKP4Q99569 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.69■□□□□ 0.58
PKP4Q99569 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PKP4Q99569 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.69■□□□□ 0.58
PKP4Q99569 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.69■□□□□ 0.58
PKP4Q99569 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PKP4Q99569 AC233702.5-201ENST00000584107 538 ntBASIC18.69■□□□□ 0.58
PKP4Q99569 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.69■□□□□ 0.58
PKP4Q99569 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.69■□□□□ 0.58
PKP4Q99569 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PKP4Q99569 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PKP4Q99569 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PKP4Q99569 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.69■□□□□ 0.58
PKP4Q99569 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PKP4Q99569 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PKP4Q99569 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PKP4Q99569 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms