Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MUC4Q99102 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MUC4Q99102 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MUC4Q99102 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
MUC4Q99102 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MUC4Q99102 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MUC4Q99102 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.03□□□□□ -0.16
MUC4Q99102 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MUC4Q99102 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MUC4Q99102 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
MUC4Q99102 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MUC4Q99102 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MUC4Q99102 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
MUC4Q99102 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.03□□□□□ -0.16
MUC4Q99102 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MUC4Q99102 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MUC4Q99102 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MUC4Q99102 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
MUC4Q99102 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
MUC4Q99102 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
MUC4Q99102 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
MUC4Q99102 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.02□□□□□ -0.16
MUC4Q99102 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MUC4Q99102 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.02□□□□□ -0.16
MUC4Q99102 AC092368.3-202ENST00000574180 1591 ntBASIC14.02□□□□□ -0.16
MUC4Q99102 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.02□□□□□ -0.16
MUC4Q99102 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
MUC4Q99102 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.02□□□□□ -0.16
MUC4Q99102 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.02□□□□□ -0.16
MUC4Q99102 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.02□□□□□ -0.16
MUC4Q99102 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.02□□□□□ -0.16
MUC4Q99102 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.02□□□□□ -0.16
MUC4Q99102 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.02□□□□□ -0.16
MUC4Q99102 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
MUC4Q99102 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MUC4Q99102 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
MUC4Q99102 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
MUC4Q99102 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
MUC4Q99102 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
MUC4Q99102 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MUC4Q99102 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MUC4Q99102 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MUC4Q99102 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
MUC4Q99102 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MUC4Q99102 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
MUC4Q99102 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MUC4Q99102 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.02□□□□□ -0.17
MUC4Q99102 POM121L13P-201ENST00000422362 380 ntBASIC14.02□□□□□ -0.17
MUC4Q99102 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
MUC4Q99102 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
MUC4Q99102 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
MUC4Q99102 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
MUC4Q99102 LINC01023-201ENST00000606054 436 ntBASIC14.02□□□□□ -0.17
MUC4Q99102 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
MUC4Q99102 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
MUC4Q99102 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.02□□□□□ -0.17
MUC4Q99102 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.02□□□□□ -0.17
MUC4Q99102 KRT8P8-201ENST00000434750 1448 ntBASIC14.01□□□□□ -0.17
MUC4Q99102 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
MUC4Q99102 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.01□□□□□ -0.17
MUC4Q99102 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MUC4Q99102 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MUC4Q99102 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MUC4Q99102 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.01□□□□□ -0.17
MUC4Q99102 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
MUC4Q99102 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
MUC4Q99102 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
MUC4Q99102 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.01□□□□□ -0.17
MUC4Q99102 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
MUC4Q99102 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
MUC4Q99102 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.01□□□□□ -0.17
MUC4Q99102 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
MUC4Q99102 UNC93B4-201ENST00000505679 747 ntBASIC14.01□□□□□ -0.17
MUC4Q99102 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.01□□□□□ -0.17
MUC4Q99102 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
MUC4Q99102 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MUC4Q99102 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.01□□□□□ -0.17
MUC4Q99102 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MUC4Q99102 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.01□□□□□ -0.17
MUC4Q99102 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MUC4Q99102 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MUC4Q99102 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MUC4Q99102 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MUC4Q99102 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
MUC4Q99102 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MUC4Q99102 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
MUC4Q99102 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MUC4Q99102 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14□□□□□ -0.17
MUC4Q99102 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14□□□□□ -0.17
MUC4Q99102 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
MUC4Q99102 AC211429.1-201ENST00000415277 523 ntBASIC14□□□□□ -0.17
MUC4Q99102 SLC29A4P2-201ENST00000504749 1089 ntBASIC14□□□□□ -0.17
MUC4Q99102 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14□□□□□ -0.17
MUC4Q99102 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14□□□□□ -0.17
MUC4Q99102 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
MUC4Q99102 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14□□□□□ -0.17
MUC4Q99102 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14□□□□□ -0.17
MUC4Q99102 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MUC4Q99102 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14□□□□□ -0.17
MUC4Q99102 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms