Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
BBS4Q96RK4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
BBS4Q96RK4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BBS4Q96RK4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.22■□□□□ 0.51
BBS4Q96RK4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.22■□□□□ 0.51
BBS4Q96RK4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
BBS4Q96RK4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.22■□□□□ 0.51
BBS4Q96RK4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BBS4Q96RK4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BBS4Q96RK4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BBS4Q96RK4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BBS4Q96RK4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BBS4Q96RK4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BBS4Q96RK4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS4Q96RK4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.21■□□□□ 0.51
BBS4Q96RK4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.21■□□□□ 0.51
BBS4Q96RK4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS4Q96RK4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BBS4Q96RK4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS4Q96RK4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BBS4Q96RK4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS4Q96RK4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS4Q96RK4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS4Q96RK4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS4Q96RK4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS4Q96RK4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS4Q96RK4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS4Q96RK4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
BBS4Q96RK4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS4Q96RK4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.21■□□□□ 0.51
BBS4Q96RK4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.21■□□□□ 0.51
BBS4Q96RK4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.21■□□□□ 0.51
BBS4Q96RK4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS4Q96RK4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.21■□□□□ 0.51
BBS4Q96RK4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS4Q96RK4 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.21■□□□□ 0.51
BBS4Q96RK4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BBS4Q96RK4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.21■□□□□ 0.51
BBS4Q96RK4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.21■□□□□ 0.51
BBS4Q96RK4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.21■□□□□ 0.51
BBS4Q96RK4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
BBS4Q96RK4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS4Q96RK4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.21■□□□□ 0.51
BBS4Q96RK4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS4Q96RK4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS4Q96RK4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.21■□□□□ 0.51
BBS4Q96RK4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS4Q96RK4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS4Q96RK4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS4Q96RK4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS4Q96RK4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
BBS4Q96RK4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BBS4Q96RK4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BBS4Q96RK4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.2■□□□□ 0.5
BBS4Q96RK4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.2■□□□□ 0.5
BBS4Q96RK4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BBS4Q96RK4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
BBS4Q96RK4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
BBS4Q96RK4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BBS4Q96RK4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BBS4Q96RK4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BBS4Q96RK4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.2■□□□□ 0.5
BBS4Q96RK4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.2■□□□□ 0.5
BBS4Q96RK4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.2■□□□□ 0.5
BBS4Q96RK4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BBS4Q96RK4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
BBS4Q96RK4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BBS4Q96RK4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.2■□□□□ 0.5
BBS4Q96RK4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.2■□□□□ 0.5
BBS4Q96RK4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.2■□□□□ 0.5
BBS4Q96RK4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
BBS4Q96RK4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.2■□□□□ 0.5
BBS4Q96RK4 AC073648.6-201ENST00000641589 218 ntBASIC18.2■□□□□ 0.5
BBS4Q96RK4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
BBS4Q96RK4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.2■□□□□ 0.5
BBS4Q96RK4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
BBS4Q96RK4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BBS4Q96RK4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BBS4Q96RK4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.2■□□□□ 0.5
BBS4Q96RK4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BBS4Q96RK4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BBS4Q96RK4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
BBS4Q96RK4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
BBS4Q96RK4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.2■□□□□ 0.5
BBS4Q96RK4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BBS4Q96RK4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BBS4Q96RK4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BBS4Q96RK4 BX323043.1-201ENST00000641006 1765 ntBASIC18.19■□□□□ 0.5
BBS4Q96RK4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.19■□□□□ 0.5
BBS4Q96RK4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BBS4Q96RK4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
BBS4Q96RK4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BBS4Q96RK4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BBS4Q96RK4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BBS4Q96RK4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BBS4Q96RK4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BBS4Q96RK4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.19■□□□□ 0.5
BBS4Q96RK4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
BBS4Q96RK4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BBS4Q96RK4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms