Protein–RNA interactions for Protein: Q96KF2

PRAC1, Small nuclear protein PRAC1, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAC1Q96KF2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
PRAC1Q96KF2 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
PRAC1Q96KF2 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
PRAC1Q96KF2 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PRAC1Q96KF2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
PRAC1Q96KF2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
PRAC1Q96KF2 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
PRAC1Q96KF2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
PRAC1Q96KF2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
PRAC1Q96KF2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC9.4□□□□□ -0.91
PRAC1Q96KF2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC9.4□□□□□ -0.91
PRAC1Q96KF2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
PRAC1Q96KF2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
PRAC1Q96KF2 CICP13-201ENST00000422015 2789 ntBASIC9.4□□□□□ -0.91
PRAC1Q96KF2 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
PRAC1Q96KF2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
PRAC1Q96KF2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
PRAC1Q96KF2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC9.4□□□□□ -0.91
PRAC1Q96KF2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 AC087742.1-201ENST00000575880 1738 ntBASIC9.39□□□□□ -0.91
PRAC1Q96KF2 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
PRAC1Q96KF2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 LINC00896-202ENST00000609602 2128 ntBASIC9.38□□□□□ -0.91
PRAC1Q96KF2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 BANP-203ENST00000393207 2438 ntTSL 2 BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PRAC1Q96KF2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms