Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 AC135050.7-201ENST00000624508 2218 ntBASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC47A1Q96FL8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SLC47A1Q96FL8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC47A1Q96FL8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC47A1Q96FL8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC47A1Q96FL8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC47A1Q96FL8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC47A1Q96FL8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SLC47A1Q96FL8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.13■□□□□ 0.49
SLC47A1Q96FL8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC47A1Q96FL8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC47A1Q96FL8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.13■□□□□ 0.49
SLC47A1Q96FL8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC47A1Q96FL8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.13■□□□□ 0.49
SLC47A1Q96FL8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC47A1Q96FL8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.13■□□□□ 0.49
SLC47A1Q96FL8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC47A1Q96FL8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
SLC47A1Q96FL8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.13■□□□□ 0.49
SLC47A1Q96FL8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC47A1Q96FL8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SLC47A1Q96FL8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC47A1Q96FL8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 AL031598.1-201ENST00000561511 1773 ntBASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 AL050303.2-201ENST00000619798 666 ntBASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 AC005332.8-201ENST00000622750 2735 ntBASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC47A1Q96FL8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 MIR663A-201ENST00000385250 93 ntBASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 ZNF815P-204ENST00000434898 1737 ntBASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC47A1Q96FL8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 Z98044.1-201ENST00000632503 1764 ntBASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms