Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM11Q96F44 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.34■□□□□ 0.85
TRIM11Q96F44 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM11Q96F44 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM11Q96F44 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.34■□□□□ 0.85
TRIM11Q96F44 AL020996.1-203ENST00000536896 2307 ntBASIC20.34■□□□□ 0.85
TRIM11Q96F44 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TRIM11Q96F44 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
TRIM11Q96F44 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.34■□□□□ 0.85
TRIM11Q96F44 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM11Q96F44 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM11Q96F44 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM11Q96F44 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM11Q96F44 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TRIM11Q96F44 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.34■□□□□ 0.85
TRIM11Q96F44 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM11Q96F44 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM11Q96F44 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM11Q96F44 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM11Q96F44 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM11Q96F44 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM11Q96F44 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.33■□□□□ 0.85
TRIM11Q96F44 AC004408.2-201ENST00000623613 2777 ntBASIC20.33■□□□□ 0.85
TRIM11Q96F44 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM11Q96F44 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM11Q96F44 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.33■□□□□ 0.85
TRIM11Q96F44 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
TRIM11Q96F44 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.33■□□□□ 0.85
TRIM11Q96F44 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM11Q96F44 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM11Q96F44 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM11Q96F44 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM11Q96F44 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM11Q96F44 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.33■□□□□ 0.84
TRIM11Q96F44 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM11Q96F44 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.33■□□□□ 0.84
TRIM11Q96F44 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM11Q96F44 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM11Q96F44 IRX1P1-201ENST00000438849 1838 ntBASIC20.32■□□□□ 0.84
TRIM11Q96F44 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM11Q96F44 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM11Q96F44 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM11Q96F44 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM11Q96F44 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM11Q96F44 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM11Q96F44 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TRIM11Q96F44 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TRIM11Q96F44 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM11Q96F44 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.32■□□□□ 0.84
TRIM11Q96F44 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM11Q96F44 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM11Q96F44 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM11Q96F44 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM11Q96F44 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
TRIM11Q96F44 AC093503.3-201ENST00000624917 2352 ntBASIC20.32■□□□□ 0.84
TRIM11Q96F44 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM11Q96F44 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM11Q96F44 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
TRIM11Q96F44 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM11Q96F44 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM11Q96F44 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM11Q96F44 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM11Q96F44 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM11Q96F44 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM11Q96F44 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TRIM11Q96F44 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM11Q96F44 AL049812.1-201ENST00000432563 2267 ntBASIC20.31■□□□□ 0.84
TRIM11Q96F44 TSPY21P-201ENST00000433481 731 ntBASIC20.31■□□□□ 0.84
TRIM11Q96F44 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.31■□□□□ 0.84
TRIM11Q96F44 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM11Q96F44 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM11Q96F44 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM11Q96F44 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM11Q96F44 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM11Q96F44 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM11Q96F44 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TRIM11Q96F44 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM11Q96F44 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM11Q96F44 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
TRIM11Q96F44 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TRIM11Q96F44 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM11Q96F44 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM11Q96F44 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM11Q96F44 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM11Q96F44 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.3■□□□□ 0.84
TRIM11Q96F44 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM11Q96F44 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM11Q96F44 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM11Q96F44 KRT18P6-201ENST00000555540 1265 ntBASIC20.3■□□□□ 0.84
TRIM11Q96F44 AL160286.2-201ENST00000567150 934 ntBASIC20.3■□□□□ 0.84
TRIM11Q96F44 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM11Q96F44 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM11Q96F44 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM11Q96F44 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM11Q96F44 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM11Q96F44 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM11Q96F44 FEM1AP3-201ENST00000403722 1741 ntBASIC20.3■□□□□ 0.84
TRIM11Q96F44 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM11Q96F44 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TRIM11Q96F44 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms