Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 MMP23A-201ENST00000234610 1017 ntBASIC19.11■□□□□ 0.65
SCAMP4Q969E2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 AC087499.1-201ENST00000418141 1075 ntBASIC19.11■□□□□ 0.65
SCAMP4Q969E2 CRYGFP-201ENST00000418459 633 ntBASIC19.11■□□□□ 0.65
SCAMP4Q969E2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 FITM1-202ENST00000559294 800 ntBASIC19.11■□□□□ 0.65
SCAMP4Q969E2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SCAMP4Q969E2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCAMP4Q969E2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCAMP4Q969E2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCAMP4Q969E2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.1■□□□□ 0.65
SCAMP4Q969E2 AIRN-201ENST00000601203 4374 ntBASIC19.1■□□□□ 0.65
SCAMP4Q969E2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.1■□□□□ 0.65
SCAMP4Q969E2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.1■□□□□ 0.65
SCAMP4Q969E2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.1■□□□□ 0.65
SCAMP4Q969E2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SCAMP4Q969E2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCAMP4Q969E2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCAMP4Q969E2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.1■□□□□ 0.65
SCAMP4Q969E2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.1■□□□□ 0.65
SCAMP4Q969E2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.1■□□□□ 0.65
SCAMP4Q969E2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.1■□□□□ 0.65
SCAMP4Q969E2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.1■□□□□ 0.65
SCAMP4Q969E2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.1■□□□□ 0.65
SCAMP4Q969E2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCAMP4Q969E2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCAMP4Q969E2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
SCAMP4Q969E2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCAMP4Q969E2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.1■□□□□ 0.65
SCAMP4Q969E2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.09■□□□□ 0.65
SCAMP4Q969E2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SCAMP4Q969E2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.09■□□□□ 0.65
SCAMP4Q969E2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCAMP4Q969E2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.09■□□□□ 0.65
SCAMP4Q969E2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SCAMP4Q969E2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.09■□□□□ 0.65
SCAMP4Q969E2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
SCAMP4Q969E2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCAMP4Q969E2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCAMP4Q969E2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SCAMP4Q969E2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.09■□□□□ 0.65
SCAMP4Q969E2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.09■□□□□ 0.65
SCAMP4Q969E2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
SCAMP4Q969E2 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.09■□□□□ 0.65
SCAMP4Q969E2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SCAMP4Q969E2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCAMP4Q969E2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCAMP4Q969E2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.09■□□□□ 0.65
SCAMP4Q969E2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SCAMP4Q969E2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCAMP4Q969E2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCAMP4Q969E2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
SCAMP4Q969E2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCAMP4Q969E2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCAMP4Q969E2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCAMP4Q969E2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.08■□□□□ 0.65
SCAMP4Q969E2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCAMP4Q969E2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCAMP4Q969E2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
SCAMP4Q969E2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
SCAMP4Q969E2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SCAMP4Q969E2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCAMP4Q969E2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SCAMP4Q969E2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCAMP4Q969E2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCAMP4Q969E2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCAMP4Q969E2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.08■□□□□ 0.64
SCAMP4Q969E2 AC211429.1-201ENST00000415277 523 ntBASIC19.08■□□□□ 0.64
SCAMP4Q969E2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCAMP4Q969E2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
SCAMP4Q969E2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.08■□□□□ 0.64
SCAMP4Q969E2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.08■□□□□ 0.64
SCAMP4Q969E2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.08■□□□□ 0.64
SCAMP4Q969E2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.08■□□□□ 0.64
SCAMP4Q969E2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.08■□□□□ 0.64
SCAMP4Q969E2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.08■□□□□ 0.64
SCAMP4Q969E2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms