Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.23■□□□□ 0.83
ATP2A3Q93084 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP2A3Q93084 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ATP2A3Q93084 DGCR10-201ENST00000609839 495 ntBASIC20.23■□□□□ 0.83
ATP2A3Q93084 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A3Q93084 AC131212.4-201ENST00000623606 975 ntBASIC20.23■□□□□ 0.83
ATP2A3Q93084 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ATP2A3Q93084 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ATP2A3Q93084 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A3Q93084 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A3Q93084 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A3Q93084 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A3Q93084 CYP2D8P-201ENST00000433633 1490 ntBASIC20.23■□□□□ 0.83
ATP2A3Q93084 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ATP2A3Q93084 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A3Q93084 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A3Q93084 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A3Q93084 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A3Q93084 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2A3Q93084 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A3Q93084 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP2A3Q93084 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A3Q93084 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP2A3Q93084 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A3Q93084 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
ATP2A3Q93084 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A3Q93084 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A3Q93084 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A3Q93084 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A3Q93084 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A3Q93084 AC113347.1-201ENST00000413321 391 ntBASIC20.22■□□□□ 0.83
ATP2A3Q93084 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.22■□□□□ 0.83
ATP2A3Q93084 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP2A3Q93084 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP2A3Q93084 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
ATP2A3Q93084 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A3Q93084 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.22■□□□□ 0.83
ATP2A3Q93084 AC010947.1-201ENST00000623454 693 ntBASIC20.22■□□□□ 0.83
ATP2A3Q93084 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.22■□□□□ 0.83
ATP2A3Q93084 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.22■□□□□ 0.83
ATP2A3Q93084 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP2A3Q93084 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
ATP2A3Q93084 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
ATP2A3Q93084 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ATP2A3Q93084 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP2A3Q93084 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A3Q93084 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.22■□□□□ 0.83
ATP2A3Q93084 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP2A3Q93084 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A3Q93084 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A3Q93084 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A3Q93084 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A3Q93084 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A3Q93084 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A3Q93084 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A3Q93084 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A3Q93084 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ATP2A3Q93084 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.21■□□□□ 0.83
ATP2A3Q93084 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A3Q93084 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A3Q93084 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ATP2A3Q93084 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.21■□□□□ 0.83
ATP2A3Q93084 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A3Q93084 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ATP2A3Q93084 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP2A3Q93084 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
ATP2A3Q93084 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A3Q93084 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ATP2A3Q93084 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A3Q93084 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A3Q93084 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
ATP2A3Q93084 AC005521.1-201ENST00000393351 872 ntBASIC20.2■□□□□ 0.82
ATP2A3Q93084 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP2A3Q93084 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP2A3Q93084 MESTP1-201ENST00000404287 994 ntBASIC20.2■□□□□ 0.82
ATP2A3Q93084 AC004980.1-204ENST00000429707 299 ntBASIC20.2■□□□□ 0.82
ATP2A3Q93084 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A3Q93084 B3GAT3P1-201ENST00000471720 806 ntBASIC20.2■□□□□ 0.82
ATP2A3Q93084 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP2A3Q93084 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A3Q93084 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.2■□□□□ 0.82
ATP2A3Q93084 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP2A3Q93084 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A3Q93084 AL691432.2-201ENST00000607222 2038 ntBASIC20.2■□□□□ 0.82
ATP2A3Q93084 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A3Q93084 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.2■□□□□ 0.82
ATP2A3Q93084 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A3Q93084 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.19■□□□□ 0.82
ATP2A3Q93084 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.19■□□□□ 0.82
ATP2A3Q93084 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.19■□□□□ 0.82
ATP2A3Q93084 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A3Q93084 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A3Q93084 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.19■□□□□ 0.82
ATP2A3Q93084 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.19■□□□□ 0.82
ATP2A3Q93084 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A3Q93084 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A3Q93084 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A3Q93084 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
ATP2A3Q93084 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A3Q93084 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms