Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 DUSP5P2-201ENST00000426873 1033 ntBASIC15.17■□□□□ 0.02
NPIPB3Q92617 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB3Q92617 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
NPIPB3Q92617 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NPIPB3Q92617 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NPIPB3Q92617 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB3Q92617 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NPIPB3Q92617 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NPIPB3Q92617 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
NPIPB3Q92617 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB3Q92617 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB3Q92617 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.17■□□□□ 0.02
NPIPB3Q92617 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB3Q92617 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB3Q92617 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPB3Q92617 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
NPIPB3Q92617 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NPIPB3Q92617 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB3Q92617 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB3Q92617 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB3Q92617 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPB3Q92617 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NPIPB3Q92617 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB3Q92617 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NPIPB3Q92617 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.16■□□□□ 0.02
NPIPB3Q92617 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB3Q92617 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.16■□□□□ 0.02
NPIPB3Q92617 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NPIPB3Q92617 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPB3Q92617 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
NPIPB3Q92617 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC15.16■□□□□ 0.02
NPIPB3Q92617 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.16■□□□□ 0.02
NPIPB3Q92617 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
NPIPB3Q92617 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB3Q92617 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB3Q92617 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NPIPB3Q92617 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NPIPB3Q92617 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NPIPB3Q92617 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB3Q92617 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB3Q92617 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
NPIPB3Q92617 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB3Q92617 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPB3Q92617 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB3Q92617 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB3Q92617 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB3Q92617 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.16■□□□□ 0.02
NPIPB3Q92617 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB3Q92617 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB3Q92617 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB3Q92617 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB3Q92617 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPB3Q92617 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB3Q92617 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.16■□□□□ 0.02
NPIPB3Q92617 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB3Q92617 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB3Q92617 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB3Q92617 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
NPIPB3Q92617 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB3Q92617 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.15■□□□□ 0.02
NPIPB3Q92617 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.15■□□□□ 0.02
NPIPB3Q92617 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.15■□□□□ 0.02
NPIPB3Q92617 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.15■□□□□ 0.02
NPIPB3Q92617 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.15■□□□□ 0.02
NPIPB3Q92617 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB3Q92617 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.15■□□□□ 0.02
NPIPB3Q92617 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.15■□□□□ 0.02
NPIPB3Q92617 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB3Q92617 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC15.15■□□□□ 0.02
NPIPB3Q92617 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.15■□□□□ 0.02
NPIPB3Q92617 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NPIPB3Q92617 RAP2CP1-201ENST00000605103 478 ntBASIC15.15■□□□□ 0.02
NPIPB3Q92617 AL137784.2-201ENST00000607332 1000 ntBASIC15.15■□□□□ 0.02
NPIPB3Q92617 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB3Q92617 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB3Q92617 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB3Q92617 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB3Q92617 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB3Q92617 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB3Q92617 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.15■□□□□ 0.02
NPIPB3Q92617 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.14■□□□□ 0.01
NPIPB3Q92617 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPB3Q92617 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NPIPB3Q92617 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPB3Q92617 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPB3Q92617 SDHAP1-207ENST00000440850 2000 ntBASIC15.14■□□□□ 0.01
NPIPB3Q92617 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.14■□□□□ 0.01
NPIPB3Q92617 AC104417.2-201ENST00000562989 1793 ntBASIC15.14■□□□□ 0.01
NPIPB3Q92617 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPB3Q92617 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPB3Q92617 AP006587.1-201ENST00000534129 1502 ntBASIC15.14■□□□□ 0.01
NPIPB3Q92617 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.14■□□□□ 0.01
NPIPB3Q92617 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPB3Q92617 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPB3Q92617 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPB3Q92617 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.14■□□□□ 0.01
NPIPB3Q92617 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPB3Q92617 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPB3Q92617 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPB3Q92617 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms