Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.14■□□□□ 0.49
TM9SF4Q92544 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM9SF4Q92544 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM9SF4Q92544 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
TM9SF4Q92544 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TM9SF4Q92544 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TM9SF4Q92544 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM9SF4Q92544 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM9SF4Q92544 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM9SF4Q92544 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM9SF4Q92544 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.13■□□□□ 0.49
TM9SF4Q92544 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM9SF4Q92544 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TM9SF4Q92544 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.13■□□□□ 0.49
TM9SF4Q92544 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM9SF4Q92544 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.13■□□□□ 0.49
TM9SF4Q92544 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM9SF4Q92544 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.13■□□□□ 0.49
TM9SF4Q92544 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.13■□□□□ 0.49
TM9SF4Q92544 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
TM9SF4Q92544 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.13■□□□□ 0.49
TM9SF4Q92544 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.13■□□□□ 0.49
TM9SF4Q92544 YBX1P10-201ENST00000444752 975 ntBASIC18.13■□□□□ 0.49
TM9SF4Q92544 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TM9SF4Q92544 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.13■□□□□ 0.49
TM9SF4Q92544 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.13■□□□□ 0.49
TM9SF4Q92544 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.13■□□□□ 0.49
TM9SF4Q92544 C2orf69P3-201ENST00000565542 1120 ntBASIC18.13■□□□□ 0.49
TM9SF4Q92544 DGCR10-201ENST00000609839 495 ntBASIC18.13■□□□□ 0.49
TM9SF4Q92544 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.13■□□□□ 0.49
TM9SF4Q92544 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM9SF4Q92544 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM9SF4Q92544 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM9SF4Q92544 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM9SF4Q92544 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TM9SF4Q92544 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TM9SF4Q92544 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM9SF4Q92544 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TM9SF4Q92544 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
TM9SF4Q92544 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
TM9SF4Q92544 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM9SF4Q92544 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TM9SF4Q92544 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TM9SF4Q92544 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM9SF4Q92544 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM9SF4Q92544 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TM9SF4Q92544 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TM9SF4Q92544 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.12■□□□□ 0.49
TM9SF4Q92544 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TM9SF4Q92544 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.12■□□□□ 0.49
TM9SF4Q92544 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM9SF4Q92544 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM9SF4Q92544 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.12■□□□□ 0.49
TM9SF4Q92544 AC005521.1-201ENST00000393351 872 ntBASIC18.12■□□□□ 0.49
TM9SF4Q92544 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.12■□□□□ 0.49
TM9SF4Q92544 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TM9SF4Q92544 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TM9SF4Q92544 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TM9SF4Q92544 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.12■□□□□ 0.49
TM9SF4Q92544 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.12■□□□□ 0.49
TM9SF4Q92544 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.12■□□□□ 0.49
TM9SF4Q92544 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TM9SF4Q92544 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.12■□□□□ 0.49
TM9SF4Q92544 AL445675.2-201ENST00000620291 557 ntBASIC18.12■□□□□ 0.49
TM9SF4Q92544 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.12■□□□□ 0.49
TM9SF4Q92544 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM9SF4Q92544 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.12■□□□□ 0.49
TM9SF4Q92544 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.12■□□□□ 0.49
TM9SF4Q92544 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TM9SF4Q92544 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM9SF4Q92544 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM9SF4Q92544 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TM9SF4Q92544 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM9SF4Q92544 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM9SF4Q92544 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM9SF4Q92544 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.11■□□□□ 0.49
TM9SF4Q92544 TUBB8P6-201ENST00000436895 1288 ntBASIC18.11■□□□□ 0.49
TM9SF4Q92544 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TM9SF4Q92544 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.11■□□□□ 0.49
TM9SF4Q92544 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TM9SF4Q92544 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM9SF4Q92544 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.11■□□□□ 0.49
TM9SF4Q92544 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TM9SF4Q92544 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.11■□□□□ 0.49
TM9SF4Q92544 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM9SF4Q92544 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM9SF4Q92544 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.11■□□□□ 0.49
TM9SF4Q92544 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM9SF4Q92544 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM9SF4Q92544 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TM9SF4Q92544 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM9SF4Q92544 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM9SF4Q92544 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM9SF4Q92544 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.1■□□□□ 0.49
TM9SF4Q92544 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.1■□□□□ 0.49
TM9SF4Q92544 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
TM9SF4Q92544 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TM9SF4Q92544 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
TM9SF4Q92544 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM9SF4Q92544 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms