Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 AC073210.2-201ENST00000430369 194 ntBASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 AC098934.4-201ENST00000564127 592 ntBASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 MYC-209ENST00000641252 345 ntBASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 LETM1P2-201ENST00000597330 2178 ntBASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 HLA-L-209ENST00000420110 1011 ntBASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 AC142086.2-201ENST00000569753 217 ntBASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 AC133041.1-202ENST00000642053 222 ntBASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RTN4IP1Q8WWV3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 AL049812.1-201ENST00000432563 2267 ntBASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 AC069152.1-201ENST00000438030 544 ntBASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 AC104581.1-202ENST00000635932 2618 ntBASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTN4IP1Q8WWV3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms