Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 NTF6B-201ENST00000591913 560 ntBASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 AL023803.3-201ENST00000615559 522 ntBASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 AC010653.2-201ENST00000623505 997 ntBASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 CKBP1-201ENST00000565489 1086 ntBASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 AC125437.2-201ENST00000625180 2167 ntBASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SH3RF2Q8TEC5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.94■□□□□ 0.78
SH3RF2Q8TEC5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SH3RF2Q8TEC5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.94■□□□□ 0.78
SH3RF2Q8TEC5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SH3RF2Q8TEC5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SH3RF2Q8TEC5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SH3RF2Q8TEC5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.94■□□□□ 0.78
SH3RF2Q8TEC5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SH3RF2Q8TEC5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SH3RF2Q8TEC5 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.94■□□□□ 0.78
SH3RF2Q8TEC5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SH3RF2Q8TEC5 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SH3RF2Q8TEC5 TSPY17P-201ENST00000450329 467 ntBASIC19.94■□□□□ 0.78
SH3RF2Q8TEC5 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.94■□□□□ 0.78
SH3RF2Q8TEC5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.94■□□□□ 0.78
SH3RF2Q8TEC5 WWOX-216ENST00000569818 525 ntBASIC19.94■□□□□ 0.78
SH3RF2Q8TEC5 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.94■□□□□ 0.78
SH3RF2Q8TEC5 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SH3RF2Q8TEC5 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SH3RF2Q8TEC5 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.94■□□□□ 0.78
SH3RF2Q8TEC5 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SH3RF2Q8TEC5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.94■□□□□ 0.78
SH3RF2Q8TEC5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
SH3RF2Q8TEC5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF2Q8TEC5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SH3RF2Q8TEC5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF2Q8TEC5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF2Q8TEC5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF2Q8TEC5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF2Q8TEC5 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF2Q8TEC5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.93■□□□□ 0.78
SH3RF2Q8TEC5 AL353719.1-201ENST00000566847 864 ntBASIC19.93■□□□□ 0.78
SH3RF2Q8TEC5 AL138966.2-201ENST00000621997 464 ntBASIC19.93■□□□□ 0.78
SH3RF2Q8TEC5 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.93■□□□□ 0.78
SH3RF2Q8TEC5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF2Q8TEC5 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.93■□□□□ 0.78
SH3RF2Q8TEC5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF2Q8TEC5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF2Q8TEC5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF2Q8TEC5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.93■□□□□ 0.78
SH3RF2Q8TEC5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF2Q8TEC5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3RF2Q8TEC5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
SH3RF2Q8TEC5 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3RF2Q8TEC5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SH3RF2Q8TEC5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3RF2Q8TEC5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3RF2Q8TEC5 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3RF2Q8TEC5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
SH3RF2Q8TEC5 AK4P3-201ENST00000418260 669 ntBASIC19.92■□□□□ 0.78
SH3RF2Q8TEC5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.92■□□□□ 0.78
SH3RF2Q8TEC5 CA15P1-201ENST00000481698 905 ntBASIC19.92■□□□□ 0.78
SH3RF2Q8TEC5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.92■□□□□ 0.78
SH3RF2Q8TEC5 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.92■□□□□ 0.78
SH3RF2Q8TEC5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SH3RF2Q8TEC5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SH3RF2Q8TEC5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.92■□□□□ 0.78
SH3RF2Q8TEC5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SH3RF2Q8TEC5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms