Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBA3Q8TBC4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBA3Q8TBC4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
UBA3Q8TBC4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBA3Q8TBC4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
UBA3Q8TBC4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.38■□□□□ 0.85
UBA3Q8TBC4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBA3Q8TBC4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBA3Q8TBC4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.38■□□□□ 0.85
UBA3Q8TBC4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBA3Q8TBC4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBA3Q8TBC4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBA3Q8TBC4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
UBA3Q8TBC4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBA3Q8TBC4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBA3Q8TBC4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBA3Q8TBC4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBA3Q8TBC4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBA3Q8TBC4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBA3Q8TBC4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBA3Q8TBC4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBA3Q8TBC4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBA3Q8TBC4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
UBA3Q8TBC4 AL596275.1-201ENST00000423464 877 ntBASIC20.37■□□□□ 0.85
UBA3Q8TBC4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
UBA3Q8TBC4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.37■□□□□ 0.85
UBA3Q8TBC4 AC011506.1-201ENST00000474329 610 ntBASIC20.37■□□□□ 0.85
UBA3Q8TBC4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.37■□□□□ 0.85
UBA3Q8TBC4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.37■□□□□ 0.85
UBA3Q8TBC4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.37■□□□□ 0.85
UBA3Q8TBC4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBA3Q8TBC4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.37■□□□□ 0.85
UBA3Q8TBC4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBA3Q8TBC4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBA3Q8TBC4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBA3Q8TBC4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBA3Q8TBC4 KRT8P41-201ENST00000533985 1514 ntBASIC20.37■□□□□ 0.85
UBA3Q8TBC4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.37■□□□□ 0.85
UBA3Q8TBC4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBA3Q8TBC4 TEX21P-204ENST00000641479 1693 ntBASIC20.36■□□□□ 0.85
UBA3Q8TBC4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBA3Q8TBC4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBA3Q8TBC4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
UBA3Q8TBC4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBA3Q8TBC4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
UBA3Q8TBC4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.36■□□□□ 0.85
UBA3Q8TBC4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.36■□□□□ 0.85
UBA3Q8TBC4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.36■□□□□ 0.85
UBA3Q8TBC4 AC008040.2-201ENST00000461049 708 ntBASIC20.36■□□□□ 0.85
UBA3Q8TBC4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBA3Q8TBC4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.36■□□□□ 0.85
UBA3Q8TBC4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBA3Q8TBC4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.36■□□□□ 0.85
UBA3Q8TBC4 AC026471.5-201ENST00000615068 467 ntBASIC20.36■□□□□ 0.85
UBA3Q8TBC4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.36■□□□□ 0.85
UBA3Q8TBC4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBA3Q8TBC4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBA3Q8TBC4 RCC2P6-201ENST00000526625 1557 ntBASIC20.36■□□□□ 0.85
UBA3Q8TBC4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBA3Q8TBC4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBA3Q8TBC4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBA3Q8TBC4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBA3Q8TBC4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.36■□□□□ 0.85
UBA3Q8TBC4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBA3Q8TBC4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBA3Q8TBC4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
UBA3Q8TBC4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.35■□□□□ 0.85
UBA3Q8TBC4 AL355355.2-201ENST00000442321 338 ntBASIC20.35■□□□□ 0.85
UBA3Q8TBC4 NUDT16P1-203ENST00000513809 620 ntBASIC20.35■□□□□ 0.85
UBA3Q8TBC4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.35■□□□□ 0.85
UBA3Q8TBC4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.35■□□□□ 0.85
UBA3Q8TBC4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.35■□□□□ 0.85
UBA3Q8TBC4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
UBA3Q8TBC4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBA3Q8TBC4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
UBA3Q8TBC4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBA3Q8TBC4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
UBA3Q8TBC4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBA3Q8TBC4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBA3Q8TBC4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBA3Q8TBC4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.35■□□□□ 0.85
UBA3Q8TBC4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBA3Q8TBC4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
UBA3Q8TBC4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBA3Q8TBC4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBA3Q8TBC4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBA3Q8TBC4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
UBA3Q8TBC4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.34■□□□□ 0.85
UBA3Q8TBC4 MESTP1-201ENST00000404287 994 ntBASIC20.34■□□□□ 0.85
UBA3Q8TBC4 AC091390.4-202ENST00000476426 537 ntBASIC20.34■□□□□ 0.85
UBA3Q8TBC4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.34■□□□□ 0.85
UBA3Q8TBC4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.34■□□□□ 0.85
UBA3Q8TBC4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.34■□□□□ 0.85
UBA3Q8TBC4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
UBA3Q8TBC4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.34■□□□□ 0.85
UBA3Q8TBC4 MIR4497-201ENST00000583208 89 ntBASIC20.34■□□□□ 0.85
UBA3Q8TBC4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
UBA3Q8TBC4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.34■□□□□ 0.85
UBA3Q8TBC4 MIR6786-201ENST00000616843 113 ntBASIC20.34■□□□□ 0.85
UBA3Q8TBC4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms