Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 AC097637.2-201ENST00000624096 1997 ntBASIC12.1□□□□□ -0.47
SVIPQ8NHG7 AP001972.5-201ENST00000624624 2338 ntBASIC12.1□□□□□ -0.47
SVIPQ8NHG7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 AC144831.1-201ENST00000573312 2656 ntBASIC12.1□□□□□ -0.47
SVIPQ8NHG7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SVIPQ8NHG7 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 HTR3B-201ENST00000260191 2011 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 PCAT18-201ENST00000579458 2598 ntTSL 2 BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SVIPQ8NHG7 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
SVIPQ8NHG7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
SVIPQ8NHG7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
SVIPQ8NHG7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
SVIPQ8NHG7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
SVIPQ8NHG7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SVIPQ8NHG7 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SVIPQ8NHG7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SVIPQ8NHG7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SVIPQ8NHG7 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.08□□□□□ -0.48
SVIPQ8NHG7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SVIPQ8NHG7 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SVIPQ8NHG7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SVIPQ8NHG7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SVIPQ8NHG7 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
SVIPQ8NHG7 AL359258.3-201ENST00000622910 2331 ntBASIC12.08□□□□□ -0.48
SVIPQ8NHG7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SVIPQ8NHG7 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SVIPQ8NHG7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC12.08□□□□□ -0.48
SVIPQ8NHG7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SVIPQ8NHG7 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SVIPQ8NHG7 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.08□□□□□ -0.48
SVIPQ8NHG7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC12.08□□□□□ -0.48
SVIPQ8NHG7 SIGLEC8-201ENST00000321424 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SVIPQ8NHG7 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SVIPQ8NHG7 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SVIPQ8NHG7 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SVIPQ8NHG7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC12.08□□□□□ -0.48
SVIPQ8NHG7 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SVIPQ8NHG7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms