Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.83■□□□□ 0.28
CPEB3Q8NE35 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.83■□□□□ 0.28
CPEB3Q8NE35 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.83■□□□□ 0.28
CPEB3Q8NE35 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPEB3Q8NE35 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
CPEB3Q8NE35 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CPEB3Q8NE35 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPEB3Q8NE35 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CPEB3Q8NE35 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 AF186192.3-201ENST00000583427 947 ntBASIC16.82■□□□□ 0.28
CPEB3Q8NE35 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPEB3Q8NE35 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 NIFKP9-201ENST00000419265 221 ntBASIC16.81■□□□□ 0.28
CPEB3Q8NE35 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 RPS2P4-201ENST00000476944 856 ntBASIC16.81■□□□□ 0.28
CPEB3Q8NE35 AP002982.1-201ENST00000492365 877 ntBASIC16.81■□□□□ 0.28
CPEB3Q8NE35 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 AL353708.3-201ENST00000610272 989 ntBASIC16.81■□□□□ 0.28
CPEB3Q8NE35 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPEB3Q8NE35 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 AL353807.1-201ENST00000427475 662 ntBASIC16.8■□□□□ 0.28
CPEB3Q8NE35 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 AL160286.2-201ENST00000567150 934 ntBASIC16.8■□□□□ 0.28
CPEB3Q8NE35 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms