Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC155Q8N6L0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CCDC155Q8N6L0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
CCDC155Q8N6L0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.77■■□□□ 1.07
CCDC155Q8N6L0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC155Q8N6L0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC155Q8N6L0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC155Q8N6L0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC155Q8N6L0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC155Q8N6L0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC155Q8N6L0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC155Q8N6L0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC155Q8N6L0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CCDC155Q8N6L0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC155Q8N6L0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC155Q8N6L0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC155Q8N6L0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC155Q8N6L0 AC128688.1-201ENST00000487626 519 ntBASIC21.76■■□□□ 1.07
CCDC155Q8N6L0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC155Q8N6L0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC155Q8N6L0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC155Q8N6L0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC155Q8N6L0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC155Q8N6L0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC155Q8N6L0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC155Q8N6L0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC155Q8N6L0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC155Q8N6L0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC155Q8N6L0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC155Q8N6L0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC155Q8N6L0 AC116351.2-201ENST00000606540 1585 ntBASIC21.75■■□□□ 1.07
CCDC155Q8N6L0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC155Q8N6L0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CCDC155Q8N6L0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CCDC155Q8N6L0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC155Q8N6L0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CCDC155Q8N6L0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC155Q8N6L0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC155Q8N6L0 TUBB8P6-201ENST00000436895 1288 ntBASIC21.75■■□□□ 1.07
CCDC155Q8N6L0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC155Q8N6L0 B3GAT3P1-201ENST00000471720 806 ntBASIC21.75■■□□□ 1.07
CCDC155Q8N6L0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC155Q8N6L0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC155Q8N6L0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC155Q8N6L0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC155Q8N6L0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
CCDC155Q8N6L0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CCDC155Q8N6L0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC155Q8N6L0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC155Q8N6L0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC155Q8N6L0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC155Q8N6L0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC155Q8N6L0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC155Q8N6L0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC155Q8N6L0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC155Q8N6L0 TSPY14P-201ENST00000303979 915 ntBASIC21.74■■□□□ 1.07
CCDC155Q8N6L0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CCDC155Q8N6L0 MESTP1-201ENST00000404287 994 ntBASIC21.74■■□□□ 1.07
CCDC155Q8N6L0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC155Q8N6L0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CCDC155Q8N6L0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.74■■□□□ 1.07
CCDC155Q8N6L0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CCDC155Q8N6L0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CCDC155Q8N6L0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC155Q8N6L0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC155Q8N6L0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC155Q8N6L0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC155Q8N6L0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC155Q8N6L0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC155Q8N6L0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC155Q8N6L0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 KRT18P16-201ENST00000510337 1294 ntBASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 AC087388.1-201ENST00000571370 1112 ntBASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 NTF6B-201ENST00000591913 560 ntBASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 RNF165-205ENST00000588679 2904 ntBASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC155Q8N6L0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms