Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CCDC170Q8IYT3 AC124283.5-201ENST00000624661 1809 ntBASIC20.64■□□□□ 0.9
CCDC170Q8IYT3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC170Q8IYT3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.64■□□□□ 0.9
CCDC170Q8IYT3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC170Q8IYT3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.64■□□□□ 0.9
CCDC170Q8IYT3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC170Q8IYT3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CCDC170Q8IYT3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.64■□□□□ 0.9
CCDC170Q8IYT3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC170Q8IYT3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC170Q8IYT3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC170Q8IYT3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
CCDC170Q8IYT3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC170Q8IYT3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC170Q8IYT3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC170Q8IYT3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC170Q8IYT3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC170Q8IYT3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC170Q8IYT3 AC105036.2-201ENST00000569468 176 ntBASIC20.64■□□□□ 0.89
CCDC170Q8IYT3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC170Q8IYT3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC170Q8IYT3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC170Q8IYT3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CCDC170Q8IYT3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC170Q8IYT3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC170Q8IYT3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC170Q8IYT3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CCDC170Q8IYT3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 LETM1P2-201ENST00000597330 2178 ntBASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC170Q8IYT3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC170Q8IYT3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC170Q8IYT3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC170Q8IYT3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC170Q8IYT3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC170Q8IYT3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC170Q8IYT3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC170Q8IYT3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC170Q8IYT3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.62■□□□□ 0.89
CCDC170Q8IYT3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC170Q8IYT3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC170Q8IYT3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC170Q8IYT3 AL121906.2-201ENST00000621597 723 ntBASIC20.62■□□□□ 0.89
CCDC170Q8IYT3 AC006557.6-201ENST00000623071 864 ntBASIC20.62■□□□□ 0.89
CCDC170Q8IYT3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC170Q8IYT3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC170Q8IYT3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC170Q8IYT3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC170Q8IYT3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC170Q8IYT3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC170Q8IYT3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC170Q8IYT3 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.62■□□□□ 0.89
CCDC170Q8IYT3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CCDC170Q8IYT3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC170Q8IYT3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC170Q8IYT3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC170Q8IYT3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
CCDC170Q8IYT3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC170Q8IYT3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC170Q8IYT3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC170Q8IYT3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC170Q8IYT3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC170Q8IYT3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC170Q8IYT3 AC026471.1-201ENST00000564629 3026 ntBASIC20.61■□□□□ 0.89
CCDC170Q8IYT3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
CCDC170Q8IYT3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.61■□□□□ 0.89
CCDC170Q8IYT3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC170Q8IYT3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC170Q8IYT3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC170Q8IYT3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CCDC170Q8IYT3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms