Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC65Q8IXS2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.33■■□□□ 1.01
CCDC65Q8IXS2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC65Q8IXS2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC65Q8IXS2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.33■■□□□ 1.01
CCDC65Q8IXS2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC65Q8IXS2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
CCDC65Q8IXS2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC65Q8IXS2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.33■■□□□ 1.01
CCDC65Q8IXS2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
CCDC65Q8IXS2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.33■■□□□ 1.01
CCDC65Q8IXS2 AC142381.4-202ENST00000563973 229 ntBASIC21.33■■□□□ 1.01
CCDC65Q8IXS2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.33■■□□□ 1.01
CCDC65Q8IXS2 AL353708.3-201ENST00000610272 989 ntBASIC21.33■■□□□ 1.01
CCDC65Q8IXS2 AL445675.2-201ENST00000620291 557 ntBASIC21.33■■□□□ 1.01
CCDC65Q8IXS2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC65Q8IXS2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
CCDC65Q8IXS2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC65Q8IXS2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC65Q8IXS2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
CCDC65Q8IXS2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.32■■□□□ 1
CCDC65Q8IXS2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CCDC65Q8IXS2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC65Q8IXS2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC65Q8IXS2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC65Q8IXS2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC65Q8IXS2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC65Q8IXS2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC65Q8IXS2 ABHD17AP1-201ENST00000358206 933 ntBASIC21.32■■□□□ 1
CCDC65Q8IXS2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.32■■□□□ 1
CCDC65Q8IXS2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC65Q8IXS2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.32■■□□□ 1
CCDC65Q8IXS2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CCDC65Q8IXS2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC65Q8IXS2 RARRES2P10-201ENST00000564312 460 ntBASIC21.32■■□□□ 1
CCDC65Q8IXS2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.32■■□□□ 1
CCDC65Q8IXS2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC65Q8IXS2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.32■■□□□ 1
CCDC65Q8IXS2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.32■■□□□ 1
CCDC65Q8IXS2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.32■■□□□ 1
CCDC65Q8IXS2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.32■■□□□ 1
CCDC65Q8IXS2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
CCDC65Q8IXS2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC65Q8IXS2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CCDC65Q8IXS2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CCDC65Q8IXS2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CCDC65Q8IXS2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CCDC65Q8IXS2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC65Q8IXS2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CCDC65Q8IXS2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.31■■□□□ 1
CCDC65Q8IXS2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC65Q8IXS2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.31■■□□□ 1
CCDC65Q8IXS2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC65Q8IXS2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC65Q8IXS2 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC65Q8IXS2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.31■■□□□ 1
CCDC65Q8IXS2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.31■■□□□ 1
CCDC65Q8IXS2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.31■■□□□ 1
CCDC65Q8IXS2 AC131212.4-201ENST00000623606 975 ntBASIC21.31■■□□□ 1
CCDC65Q8IXS2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC65Q8IXS2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC65Q8IXS2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC65Q8IXS2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CCDC65Q8IXS2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.31■■□□□ 1
CCDC65Q8IXS2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC65Q8IXS2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC65Q8IXS2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CCDC65Q8IXS2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC65Q8IXS2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC65Q8IXS2 AC120498.9-201ENST00000339021 3867 ntBASIC21.3■■□□□ 1
CCDC65Q8IXS2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CCDC65Q8IXS2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.3■■□□□ 1
CCDC65Q8IXS2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC65Q8IXS2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC65Q8IXS2 KSR1P1-201ENST00000446298 240 ntBASIC21.3■■□□□ 1
CCDC65Q8IXS2 AC098590.1-201ENST00000468126 897 ntBASIC21.3■■□□□ 1
CCDC65Q8IXS2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.3■■□□□ 1
CCDC65Q8IXS2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.3■■□□□ 1
CCDC65Q8IXS2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.3■■□□□ 1
CCDC65Q8IXS2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.3■■□□□ 1
CCDC65Q8IXS2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CCDC65Q8IXS2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC65Q8IXS2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC65Q8IXS2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.3■■□□□ 1
CCDC65Q8IXS2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC65Q8IXS2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CCDC65Q8IXS2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CCDC65Q8IXS2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC65Q8IXS2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC65Q8IXS2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms