Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 AC011506.1-201ENST00000474329 610 ntBASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 AC073912.3-201ENST00000624414 853 ntBASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.23■□□□□ 0.83
SCUBE3Q8IX30 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SCUBE3Q8IX30 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCUBE3Q8IX30 RCC2P6-201ENST00000526625 1557 ntBASIC20.22■□□□□ 0.83
SCUBE3Q8IX30 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCUBE3Q8IX30 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCUBE3Q8IX30 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.22■□□□□ 0.83
SCUBE3Q8IX30 NUDT16P1-203ENST00000513809 620 ntBASIC20.22■□□□□ 0.83
SCUBE3Q8IX30 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.22■□□□□ 0.83
SCUBE3Q8IX30 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.22■□□□□ 0.83
SCUBE3Q8IX30 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SCUBE3Q8IX30 AC026471.5-201ENST00000615068 467 ntBASIC20.22■□□□□ 0.83
SCUBE3Q8IX30 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCUBE3Q8IX30 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCUBE3Q8IX30 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SCUBE3Q8IX30 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCUBE3Q8IX30 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCUBE3Q8IX30 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.22■□□□□ 0.83
SCUBE3Q8IX30 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
SCUBE3Q8IX30 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCUBE3Q8IX30 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 MESTP1-201ENST00000404287 994 ntBASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 AL355355.2-201ENST00000442321 338 ntBASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 AC026271.3-201ENST00000571884 352 ntBASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 MIR4497-201ENST00000583208 89 ntBASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 AC130371.2-201ENST00000619443 611 ntBASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 TEX21P-204ENST00000641479 1693 ntBASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.21■□□□□ 0.83
SCUBE3Q8IX30 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.2■□□□□ 0.82
SCUBE3Q8IX30 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCUBE3Q8IX30 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCUBE3Q8IX30 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.2■□□□□ 0.82
SCUBE3Q8IX30 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCUBE3Q8IX30 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCUBE3Q8IX30 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCUBE3Q8IX30 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SCUBE3Q8IX30 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SCUBE3Q8IX30 ECEL1P3-201ENST00000427961 737 ntBASIC20.2■□□□□ 0.82
SCUBE3Q8IX30 AC008040.2-201ENST00000461049 708 ntBASIC20.2■□□□□ 0.82
SCUBE3Q8IX30 AC091390.4-202ENST00000476426 537 ntBASIC20.2■□□□□ 0.82
SCUBE3Q8IX30 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SCUBE3Q8IX30 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.2■□□□□ 0.82
SCUBE3Q8IX30 AP003071.4-201ENST00000562276 1284 ntBASIC20.2■□□□□ 0.82
SCUBE3Q8IX30 MIR6786-201ENST00000616843 113 ntBASIC20.2■□□□□ 0.82
SCUBE3Q8IX30 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SCUBE3Q8IX30 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCUBE3Q8IX30 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SCUBE3Q8IX30 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SCUBE3Q8IX30 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.2■□□□□ 0.82
SCUBE3Q8IX30 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.2■□□□□ 0.82
SCUBE3Q8IX30 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.19■□□□□ 0.82
SCUBE3Q8IX30 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms