Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 AC073195.1-201ENST00000607241 877 ntBASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 AL135905.2-201ENST00000584934 1404 ntBASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 AC026271.3-201ENST00000571884 352 ntBASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 KRT16P1-201ENST00000399124 1418 ntBASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 TSPY23P-201ENST00000440136 739 ntBASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms