Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 AC073195.1-201ENST00000607241 877 ntBASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 AL135905.2-201ENST00000584934 1404 ntBASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 AC026271.3-201ENST00000571884 352 ntBASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
COLCA1Q6ZS62 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 KRT16P1-201ENST00000399124 1418 ntBASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 TSPY23P-201ENST00000440136 739 ntBASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COLCA1Q6ZS62 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.54■□□□□ 0.24
COLCA1Q6ZS62 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms