Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF111Q6ZNA4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF111Q6ZNA4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF111Q6ZNA4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF111Q6ZNA4 BICD1-207ENST00000551848 1962 ntBASIC18.66■□□□□ 0.58
RNF111Q6ZNA4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF111Q6ZNA4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF111Q6ZNA4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF111Q6ZNA4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF111Q6ZNA4 KRT8P20-201ENST00000423953 1409 ntBASIC18.66■□□□□ 0.58
RNF111Q6ZNA4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 AC005829.2-201ENST00000571422 1056 ntBASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 KRT8P17-201ENST00000453110 1448 ntBASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 AL354751.1-201ENST00000412768 1863 ntBASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF111Q6ZNA4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF111Q6ZNA4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF111Q6ZNA4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RNF111Q6ZNA4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
RNF111Q6ZNA4 AIRN-201ENST00000601203 4374 ntBASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 AC090164.3-201ENST00000610780 2143 ntBASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF111Q6ZNA4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF111Q6ZNA4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF111Q6ZNA4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF111Q6ZNA4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF111Q6ZNA4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF111Q6ZNA4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF111Q6ZNA4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF111Q6ZNA4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RNF111Q6ZNA4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF111Q6ZNA4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF111Q6ZNA4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF111Q6ZNA4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF111Q6ZNA4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF111Q6ZNA4 WIZP1-201ENST00000531444 2299 ntBASIC18.63■□□□□ 0.57
RNF111Q6ZNA4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF111Q6ZNA4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RNF111Q6ZNA4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF111Q6ZNA4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RNF111Q6ZNA4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF111Q6ZNA4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF111Q6ZNA4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF111Q6ZNA4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RNF111Q6ZNA4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms