Protein–RNA interactions for Protein: Q6UWJ1

TMCO3, Transmembrane and coiled-coil domain-containing protein 3, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3Q6UWJ1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.82■□□□□ 0.92
TMCO3Q6UWJ1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMCO3Q6UWJ1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMCO3Q6UWJ1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMCO3Q6UWJ1 KRT17P1-201ENST00000399211 1546 ntBASIC20.82■□□□□ 0.92
TMCO3Q6UWJ1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TMCO3Q6UWJ1 NOC2LP2-201ENST00000407594 1944 ntBASIC20.82■□□□□ 0.92
TMCO3Q6UWJ1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMCO3Q6UWJ1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.82■□□□□ 0.92
TMCO3Q6UWJ1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TMCO3Q6UWJ1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.81■□□□□ 0.92
TMCO3Q6UWJ1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMCO3Q6UWJ1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.81■□□□□ 0.92
TMCO3Q6UWJ1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMCO3Q6UWJ1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMCO3Q6UWJ1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.81■□□□□ 0.92
TMCO3Q6UWJ1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TMCO3Q6UWJ1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TMCO3Q6UWJ1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.81■□□□□ 0.92
TMCO3Q6UWJ1 LSM12P1-201ENST00000411836 588 ntBASIC20.81■□□□□ 0.92
TMCO3Q6UWJ1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.81■□□□□ 0.92
TMCO3Q6UWJ1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.81■□□□□ 0.92
TMCO3Q6UWJ1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.81■□□□□ 0.92
TMCO3Q6UWJ1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.81■□□□□ 0.92
TMCO3Q6UWJ1 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMCO3Q6UWJ1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMCO3Q6UWJ1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMCO3Q6UWJ1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.81■□□□□ 0.92
TMCO3Q6UWJ1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMCO3Q6UWJ1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMCO3Q6UWJ1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
TMCO3Q6UWJ1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 NOC2LP1-202ENST00000452600 2235 ntBASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 NCF1B-203ENST00000435988 1254 ntBASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.8■□□□□ 0.92
TMCO3Q6UWJ1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 BX276092.2-201ENST00000417668 665 ntBASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 AC090164.3-201ENST00000610780 2143 ntBASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMCO3Q6UWJ1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMCO3Q6UWJ1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMCO3Q6UWJ1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
TMCO3Q6UWJ1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMCO3Q6UWJ1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMCO3Q6UWJ1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMCO3Q6UWJ1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.78■□□□□ 0.92
TMCO3Q6UWJ1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
TMCO3Q6UWJ1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMCO3Q6UWJ1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMCO3Q6UWJ1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMCO3Q6UWJ1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMCO3Q6UWJ1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.78■□□□□ 0.92
TMCO3Q6UWJ1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
TMCO3Q6UWJ1 GPX1P1-201ENST00000388829 606 ntBASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms