Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM53Q6P2H8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM53Q6P2H8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.57■□□□□ 0.4
TMEM53Q6P2H8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 HLA-G-202ENST00000376815 851 ntBASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 HLA-G-203ENST00000376818 1127 ntBASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TMEM53Q6P2H8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 AL138781.2-201ENST00000617896 1843 ntBASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 AC005332.7-201ENST00000614046 2005 ntBASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM53Q6P2H8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 AL390719.1-204ENST00000412397 1219 ntBASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 AC023632.3-201ENST00000521633 145 ntBASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 AC098934.4-201ENST00000564127 592 ntBASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 AL031963.3-201ENST00000606441 850 ntBASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 MYC-209ENST00000641252 345 ntBASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 AC090340.1-201ENST00000620778 4980 ntBASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 KRT8P20-201ENST00000423953 1409 ntBASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM53Q6P2H8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 AC125437.2-201ENST00000625180 2167 ntBASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms