Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KRT40Q6A162 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC22.29■■□□□ 1.16
KRT40Q6A162 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KRT40Q6A162 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC22.29■■□□□ 1.16
KRT40Q6A162 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KRT40Q6A162 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KRT40Q6A162 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC22.28■■□□□ 1.16
KRT40Q6A162 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.28■■□□□ 1.16
KRT40Q6A162 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
KRT40Q6A162 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KRT40Q6A162 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
KRT40Q6A162 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KRT40Q6A162 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KRT40Q6A162 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.28■■□□□ 1.16
KRT40Q6A162 RPS2P55-201ENST00000397318 883 ntBASIC22.28■■□□□ 1.16
KRT40Q6A162 AC133681.1-201ENST00000465482 601 ntBASIC22.28■■□□□ 1.16
KRT40Q6A162 AC107956.1-201ENST00000494359 873 ntBASIC22.28■■□□□ 1.16
KRT40Q6A162 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.28■■□□□ 1.16
KRT40Q6A162 AC233702.5-201ENST00000584107 538 ntBASIC22.28■■□□□ 1.16
KRT40Q6A162 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC22.28■■□□□ 1.16
KRT40Q6A162 HLA-A-209ENST00000638375 975 ntBASIC22.28■■□□□ 1.16
KRT40Q6A162 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KRT40Q6A162 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
KRT40Q6A162 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
KRT40Q6A162 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC22.28■■□□□ 1.16
KRT40Q6A162 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC22.28■■□□□ 1.16
KRT40Q6A162 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KRT40Q6A162 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
KRT40Q6A162 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KRT40Q6A162 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.27■■□□□ 1.16
KRT40Q6A162 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KRT40Q6A162 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.27■■□□□ 1.16
KRT40Q6A162 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
KRT40Q6A162 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.27■■□□□ 1.16
KRT40Q6A162 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC22.27■■□□□ 1.16
KRT40Q6A162 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KRT40Q6A162 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KRT40Q6A162 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
KRT40Q6A162 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
KRT40Q6A162 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
KRT40Q6A162 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
KRT40Q6A162 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KRT40Q6A162 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KRT40Q6A162 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
KRT40Q6A162 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KRT40Q6A162 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KRT40Q6A162 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KRT40Q6A162 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
KRT40Q6A162 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KRT40Q6A162 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
KRT40Q6A162 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.27■■□□□ 1.16
KRT40Q6A162 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
KRT40Q6A162 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
KRT40Q6A162 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KRT40Q6A162 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
KRT40Q6A162 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
KRT40Q6A162 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC22.26■■□□□ 1.15
KRT40Q6A162 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KRT40Q6A162 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KRT40Q6A162 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.26■■□□□ 1.15
KRT40Q6A162 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KRT40Q6A162 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.26■■□□□ 1.15
KRT40Q6A162 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
KRT40Q6A162 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.26■■□□□ 1.15
KRT40Q6A162 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC22.26■■□□□ 1.15
KRT40Q6A162 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.26■■□□□ 1.15
KRT40Q6A162 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.26■■□□□ 1.15
KRT40Q6A162 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.26■■□□□ 1.15
KRT40Q6A162 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC22.26■■□□□ 1.15
KRT40Q6A162 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
KRT40Q6A162 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC22.26■■□□□ 1.15
KRT40Q6A162 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
KRT40Q6A162 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
KRT40Q6A162 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
KRT40Q6A162 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC22.26■■□□□ 1.15
KRT40Q6A162 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KRT40Q6A162 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KRT40Q6A162 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC22.26■■□□□ 1.15
KRT40Q6A162 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
KRT40Q6A162 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
KRT40Q6A162 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22.26■■□□□ 1.15
KRT40Q6A162 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.26■■□□□ 1.15
KRT40Q6A162 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
KRT40Q6A162 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
KRT40Q6A162 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
KRT40Q6A162 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC22.25■■□□□ 1.15
KRT40Q6A162 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
KRT40Q6A162 AL161938.1-201ENST00000569833 2180 ntBASIC22.25■■□□□ 1.15
KRT40Q6A162 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
KRT40Q6A162 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
KRT40Q6A162 AC012618.2-201ENST00000428058 849 ntBASIC22.25■■□□□ 1.15
KRT40Q6A162 KRT16P5-201ENST00000455284 522 ntBASIC22.25■■□□□ 1.15
KRT40Q6A162 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22.25■■□□□ 1.15
KRT40Q6A162 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.25■■□□□ 1.15
KRT40Q6A162 AC110285.5-201ENST00000611501 352 ntBASIC22.25■■□□□ 1.15
KRT40Q6A162 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
KRT40Q6A162 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
KRT40Q6A162 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
KRT40Q6A162 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
KRT40Q6A162 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms