Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 AL355355.2-201ENST00000442321 338 ntBASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 CR392000.1-201ENST00000624770 1228 ntBASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 AL031985.4-201ENST00000642138 673 ntBASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 TNXA-203ENST00000507684 2038 ntBASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 NUDT16P1-203ENST00000513809 620 ntBASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 HLA-A-209ENST00000638375 975 ntBASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TTC39BQ5VTQ0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TTC39BQ5VTQ0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TTC39BQ5VTQ0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
TTC39BQ5VTQ0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TTC39BQ5VTQ0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TTC39BQ5VTQ0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TTC39BQ5VTQ0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TTC39BQ5VTQ0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.01■□□□□ 0.79
TTC39BQ5VTQ0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TTC39BQ5VTQ0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TTC39BQ5VTQ0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.01■□□□□ 0.79
TTC39BQ5VTQ0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TTC39BQ5VTQ0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TTC39BQ5VTQ0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.01■□□□□ 0.79
TTC39BQ5VTQ0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.01■□□□□ 0.79
TTC39BQ5VTQ0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.01■□□□□ 0.79
TTC39BQ5VTQ0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.01■□□□□ 0.79
TTC39BQ5VTQ0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.01■□□□□ 0.79
TTC39BQ5VTQ0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TTC39BQ5VTQ0 AC131212.4-201ENST00000623606 975 ntBASIC20.01■□□□□ 0.79
TTC39BQ5VTQ0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TTC39BQ5VTQ0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TTC39BQ5VTQ0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
TTC39BQ5VTQ0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TTC39BQ5VTQ0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.01■□□□□ 0.79
TTC39BQ5VTQ0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TTC39BQ5VTQ0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TTC39BQ5VTQ0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 AP003071.4-201ENST00000562276 1284 ntBASIC20■□□□□ 0.79
TTC39BQ5VTQ0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20■□□□□ 0.79
TTC39BQ5VTQ0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms