Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 AL354751.1-201ENST00000412768 1863 ntBASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 SDHAP1-207ENST00000440850 2000 ntBASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
LINC00242Q5T6M2 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
LINC00242Q5T6M2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
LINC00242Q5T6M2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.15□□□□□ -0.31
LINC00242Q5T6M2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 AC104417.2-201ENST00000562989 1793 ntBASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00242Q5T6M2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 KRT17P1-201ENST00000399211 1546 ntBASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 ZNRF2P3-201ENST00000424200 374 ntBASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 AC034268.1-201ENST00000441047 882 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms