Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YBX1P67809 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YBX1P67809 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
YBX1P67809 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
YBX1P67809 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.76■□□□□ 0.59
YBX1P67809 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.76■□□□□ 0.59
YBX1P67809 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
YBX1P67809 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.76■□□□□ 0.59
YBX1P67809 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.76■□□□□ 0.59
YBX1P67809 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
YBX1P67809 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.76■□□□□ 0.59
YBX1P67809 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.76■□□□□ 0.59
YBX1P67809 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
YBX1P67809 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YBX1P67809 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YBX1P67809 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
YBX1P67809 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
YBX1P67809 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YBX1P67809 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
YBX1P67809 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
YBX1P67809 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
YBX1P67809 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
YBX1P67809 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.75■□□□□ 0.59
YBX1P67809 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YBX1P67809 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
YBX1P67809 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.75■□□□□ 0.59
YBX1P67809 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
YBX1P67809 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YBX1P67809 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YBX1P67809 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
YBX1P67809 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.75■□□□□ 0.59
YBX1P67809 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
YBX1P67809 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YBX1P67809 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
YBX1P67809 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.75■□□□□ 0.59
YBX1P67809 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.75■□□□□ 0.59
YBX1P67809 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.75■□□□□ 0.59
YBX1P67809 AC008550.1-201ENST00000511500 884 ntBASIC18.75■□□□□ 0.59
YBX1P67809 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.75■□□□□ 0.59
YBX1P67809 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
YBX1P67809 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.75■□□□□ 0.59
YBX1P67809 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.75■□□□□ 0.59
YBX1P67809 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
YBX1P67809 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
YBX1P67809 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.75■□□□□ 0.59
YBX1P67809 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
YBX1P67809 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
YBX1P67809 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.75■□□□□ 0.59
YBX1P67809 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.75■□□□□ 0.59
YBX1P67809 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YBX1P67809 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
YBX1P67809 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
YBX1P67809 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.74■□□□□ 0.59
YBX1P67809 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YBX1P67809 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YBX1P67809 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YBX1P67809 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
YBX1P67809 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
YBX1P67809 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YBX1P67809 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YBX1P67809 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
YBX1P67809 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.74■□□□□ 0.59
YBX1P67809 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YBX1P67809 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YBX1P67809 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.74■□□□□ 0.59
YBX1P67809 RPS2P4-201ENST00000476944 856 ntBASIC18.74■□□□□ 0.59
YBX1P67809 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YBX1P67809 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.74■□□□□ 0.59
YBX1P67809 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.74■□□□□ 0.59
YBX1P67809 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YBX1P67809 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.74■□□□□ 0.59
YBX1P67809 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
YBX1P67809 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.74■□□□□ 0.59
YBX1P67809 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
YBX1P67809 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YBX1P67809 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
YBX1P67809 AC007613.1-201ENST00000572811 2597 ntBASIC18.74■□□□□ 0.59
YBX1P67809 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.74■□□□□ 0.59
YBX1P67809 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
YBX1P67809 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
YBX1P67809 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
YBX1P67809 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
YBX1P67809 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.73■□□□□ 0.59
YBX1P67809 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
YBX1P67809 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.73■□□□□ 0.59
YBX1P67809 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
YBX1P67809 RPS2P55-201ENST00000397318 883 ntBASIC18.73■□□□□ 0.59
YBX1P67809 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
YBX1P67809 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.73■□□□□ 0.59
YBX1P67809 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.73■□□□□ 0.59
YBX1P67809 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
YBX1P67809 AC107956.1-201ENST00000494359 873 ntBASIC18.73■□□□□ 0.59
YBX1P67809 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
YBX1P67809 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
YBX1P67809 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.73■□□□□ 0.59
YBX1P67809 RARRES2P10-201ENST00000564312 460 ntBASIC18.73■□□□□ 0.59
YBX1P67809 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.73■□□□□ 0.59
YBX1P67809 AF186192.3-201ENST00000583427 947 ntBASIC18.73■□□□□ 0.59
YBX1P67809 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.73■□□□□ 0.59
YBX1P67809 HLA-A-209ENST00000638375 975 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms