Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RPS3AP61247 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
RPS3AP61247 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.98■□□□□ 0.47
RPS3AP61247 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
RPS3AP61247 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS3AP61247 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS3AP61247 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RPS3AP61247 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS3AP61247 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS3AP61247 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.98■□□□□ 0.47
RPS3AP61247 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS3AP61247 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.98■□□□□ 0.47
RPS3AP61247 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS3AP61247 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS3AP61247 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS3AP61247 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS3AP61247 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS3AP61247 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS3AP61247 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.98■□□□□ 0.47
RPS3AP61247 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.98■□□□□ 0.47
RPS3AP61247 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.98■□□□□ 0.47
RPS3AP61247 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.98■□□□□ 0.47
RPS3AP61247 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS3AP61247 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RPS3AP61247 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.98■□□□□ 0.47
RPS3AP61247 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS3AP61247 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RPS3AP61247 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.98■□□□□ 0.47
RPS3AP61247 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS3AP61247 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.98■□□□□ 0.47
RPS3AP61247 AL138781.2-201ENST00000617896 1843 ntBASIC17.98■□□□□ 0.47
RPS3AP61247 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS3AP61247 TMEM179-206ENST00000616017 1645 ntBASIC17.98■□□□□ 0.47
RPS3AP61247 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RPS3AP61247 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.98■□□□□ 0.47
RPS3AP61247 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPS3AP61247 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPS3AP61247 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPS3AP61247 TREX1-205ENST00000625293 1783 ntBASIC17.97■□□□□ 0.47
RPS3AP61247 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.97■□□□□ 0.47
RPS3AP61247 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPS3AP61247 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RPS3AP61247 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPS3AP61247 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RPS3AP61247 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.97■□□□□ 0.47
RPS3AP61247 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.97■□□□□ 0.47
RPS3AP61247 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RPS3AP61247 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.97■□□□□ 0.47
RPS3AP61247 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
RPS3AP61247 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.97■□□□□ 0.47
RPS3AP61247 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RPS3AP61247 AC073648.6-201ENST00000641589 218 ntBASIC17.97■□□□□ 0.47
RPS3AP61247 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPS3AP61247 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPS3AP61247 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RPS3AP61247 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPS3AP61247 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.97■□□□□ 0.47
RPS3AP61247 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RPS3AP61247 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPS3AP61247 KRT8P17-201ENST00000453110 1448 ntBASIC17.97■□□□□ 0.47
RPS3AP61247 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS3AP61247 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS3AP61247 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS3AP61247 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.96■□□□□ 0.47
RPS3AP61247 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RPS3AP61247 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RPS3AP61247 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS3AP61247 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPS3AP61247 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS3AP61247 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPS3AP61247 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.96■□□□□ 0.47
RPS3AP61247 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS3AP61247 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.96■□□□□ 0.47
RPS3AP61247 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.96■□□□□ 0.47
RPS3AP61247 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RPS3AP61247 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPS3AP61247 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.96■□□□□ 0.47
RPS3AP61247 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
RPS3AP61247 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.96■□□□□ 0.47
RPS3AP61247 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.96■□□□□ 0.47
RPS3AP61247 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS3AP61247 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RPS3AP61247 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS3AP61247 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.96■□□□□ 0.47
RPS3AP61247 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS3AP61247 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS3AP61247 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
RPS3AP61247 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS3AP61247 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS3AP61247 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.46
RPS3AP61247 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
RPS3AP61247 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.96■□□□□ 0.46
RPS3AP61247 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS3AP61247 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS3AP61247 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.95■□□□□ 0.46
RPS3AP61247 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RPS3AP61247 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RPS3AP61247 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS3AP61247 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.95■□□□□ 0.46
RPS3AP61247 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms