Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.53■□□□□ 0.4
CXCR4P61073 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CXCR4P61073 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CXCR4P61073 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CXCR4P61073 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CXCR4P61073 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CXCR4P61073 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.52■□□□□ 0.4
CXCR4P61073 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CXCR4P61073 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
CXCR4P61073 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CXCR4P61073 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CXCR4P61073 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CXCR4P61073 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CXCR4P61073 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CXCR4P61073 AC138932.1-201ENST00000534164 6830 ntBASIC17.52■□□□□ 0.4
CXCR4P61073 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.52■□□□□ 0.4
CXCR4P61073 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CXCR4P61073 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CXCR4P61073 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.52■□□□□ 0.4
CXCR4P61073 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CXCR4P61073 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CXCR4P61073 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CXCR4P61073 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.52■□□□□ 0.4
CXCR4P61073 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.52■□□□□ 0.4
CXCR4P61073 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.52■□□□□ 0.4
CXCR4P61073 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CXCR4P61073 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CXCR4P61073 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CXCR4P61073 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CXCR4P61073 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CXCR4P61073 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CXCR4P61073 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CXCR4P61073 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CXCR4P61073 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.51■□□□□ 0.39
CXCR4P61073 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.51■□□□□ 0.39
CXCR4P61073 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CXCR4P61073 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CXCR4P61073 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CXCR4P61073 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CXCR4P61073 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CXCR4P61073 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
CXCR4P61073 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.51■□□□□ 0.39
CXCR4P61073 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CXCR4P61073 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CXCR4P61073 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CXCR4P61073 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.51■□□□□ 0.39
CXCR4P61073 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CXCR4P61073 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.51■□□□□ 0.39
CXCR4P61073 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CXCR4P61073 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CXCR4P61073 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
CXCR4P61073 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CXCR4P61073 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.51■□□□□ 0.39
CXCR4P61073 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CXCR4P61073 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.51■□□□□ 0.39
CXCR4P61073 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.51■□□□□ 0.39
CXCR4P61073 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CXCR4P61073 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CXCR4P61073 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CXCR4P61073 AC067852.2-201ENST00000590513 2313 ntBASIC17.5■□□□□ 0.39
CXCR4P61073 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXCR4P61073 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXCR4P61073 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXCR4P61073 AL162741.1-201ENST00000565563 1558 ntBASIC17.5■□□□□ 0.39
CXCR4P61073 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.5■□□□□ 0.39
CXCR4P61073 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXCR4P61073 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.5■□□□□ 0.39
CXCR4P61073 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXCR4P61073 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXCR4P61073 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXCR4P61073 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXCR4P61073 KRT18P68-201ENST00000392293 1000 ntBASIC17.5■□□□□ 0.39
CXCR4P61073 AC137761.2-201ENST00000561729 223 ntBASIC17.5■□□□□ 0.39
CXCR4P61073 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.5■□□□□ 0.39
CXCR4P61073 AC145350.3-201ENST00000569033 163 ntBASIC17.5■□□□□ 0.39
CXCR4P61073 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
CXCR4P61073 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CXCR4P61073 MFSD11-216ENST00000590393 1141 ntBASIC17.5■□□□□ 0.39
CXCR4P61073 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CXCR4P61073 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.5■□□□□ 0.39
CXCR4P61073 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CXCR4P61073 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CXCR4P61073 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CXCR4P61073 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.5■□□□□ 0.39
CXCR4P61073 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CXCR4P61073 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXCR4P61073 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.5■□□□□ 0.39
CXCR4P61073 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXCR4P61073 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXCR4P61073 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXCR4P61073 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CXCR4P61073 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.49■□□□□ 0.39
CXCR4P61073 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.49■□□□□ 0.39
CXCR4P61073 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXCR4P61073 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CXCR4P61073 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.49■□□□□ 0.39
CXCR4P61073 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CXCR4P61073 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXCR4P61073 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
CXCR4P61073 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms