Protein–RNA interactions for Protein: P60059

SEC61G, Protein transport protein Sec61 subunit gamma, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61GP60059 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61GP60059 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
SEC61GP60059 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61GP60059 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61GP60059 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61GP60059 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC10.7□□□□□ -0.7
SEC61GP60059 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61GP60059 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 OXCT2P1-201ENST00000447263 1535 ntBASIC10.69□□□□□ -0.7
SEC61GP60059 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
SEC61GP60059 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC10.69□□□□□ -0.7
SEC61GP60059 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 AC067852.2-201ENST00000590513 2313 ntBASIC10.69□□□□□ -0.7
SEC61GP60059 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC10.69□□□□□ -0.7
SEC61GP60059 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC10.69□□□□□ -0.7
SEC61GP60059 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC10.69□□□□□ -0.7
SEC61GP60059 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61GP60059 MIR219A2-201ENST00000608502 1504 ntBASIC10.68□□□□□ -0.7
SEC61GP60059 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
SEC61GP60059 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61GP60059 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
SEC61GP60059 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC10.68□□□□□ -0.7
SEC61GP60059 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61GP60059 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61GP60059 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61GP60059 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61GP60059 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
SEC61GP60059 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC10.68□□□□□ -0.7
SEC61GP60059 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
SEC61GP60059 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61GP60059 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61GP60059 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
SEC61GP60059 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
SEC61GP60059 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61GP60059 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC10.68□□□□□ -0.7
SEC61GP60059 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61GP60059 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61GP60059 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC10.68□□□□□ -0.7
SEC61GP60059 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
SEC61GP60059 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61GP60059 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61GP60059 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61GP60059 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61GP60059 TNRC18P2-201ENST00000417666 2714 ntBASIC10.68□□□□□ -0.7
SEC61GP60059 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61GP60059 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
SEC61GP60059 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61GP60059 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC10.68□□□□□ -0.7
SEC61GP60059 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61GP60059 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61GP60059 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61GP60059 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61GP60059 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC10.67□□□□□ -0.7
SEC61GP60059 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC10.67□□□□□ -0.7
SEC61GP60059 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61GP60059 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61GP60059 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
SEC61GP60059 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC10.67□□□□□ -0.7
SEC61GP60059 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61GP60059 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC10.67□□□□□ -0.7
SEC61GP60059 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
SEC61GP60059 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SEC61GP60059 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC10.67□□□□□ -0.7
SEC61GP60059 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
SEC61GP60059 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC10.67□□□□□ -0.7
SEC61GP60059 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC10.67□□□□□ -0.7
SEC61GP60059 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
SEC61GP60059 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms