Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.13■□□□□ 0.33
CAV3P56539 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.13■□□□□ 0.33
CAV3P56539 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAV3P56539 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAV3P56539 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAV3P56539 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAV3P56539 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.13■□□□□ 0.33
CAV3P56539 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.13■□□□□ 0.33
CAV3P56539 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAV3P56539 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.13■□□□□ 0.33
CAV3P56539 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAV3P56539 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAV3P56539 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.13■□□□□ 0.33
CAV3P56539 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.13■□□□□ 0.33
CAV3P56539 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CAV3P56539 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.13■□□□□ 0.33
CAV3P56539 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.13■□□□□ 0.33
CAV3P56539 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAV3P56539 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.13■□□□□ 0.33
CAV3P56539 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAV3P56539 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAV3P56539 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.13■□□□□ 0.33
CAV3P56539 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAV3P56539 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAV3P56539 TEX21P-204ENST00000641479 1693 ntBASIC17.13■□□□□ 0.33
CAV3P56539 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CAV3P56539 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAV3P56539 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAV3P56539 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAV3P56539 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAV3P56539 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.12■□□□□ 0.33
CAV3P56539 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAV3P56539 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAV3P56539 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CAV3P56539 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.12■□□□□ 0.33
CAV3P56539 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAV3P56539 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CAV3P56539 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAV3P56539 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAV3P56539 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAV3P56539 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CAV3P56539 AC068880.1-201ENST00000507289 2297 ntBASIC17.12■□□□□ 0.33
CAV3P56539 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.12■□□□□ 0.33
CAV3P56539 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAV3P56539 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAV3P56539 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAV3P56539 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAV3P56539 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.12■□□□□ 0.33
CAV3P56539 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.12■□□□□ 0.33
CAV3P56539 AC069236.1-201ENST00000604339 616 ntBASIC17.12■□□□□ 0.33
CAV3P56539 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.12■□□□□ 0.33
CAV3P56539 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAV3P56539 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAV3P56539 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.12■□□□□ 0.33
CAV3P56539 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAV3P56539 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAV3P56539 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CAV3P56539 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.12■□□□□ 0.33
CAV3P56539 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAV3P56539 AC087633.2-202ENST00000565166 1439 ntBASIC17.12■□□□□ 0.33
CAV3P56539 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAV3P56539 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAV3P56539 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAV3P56539 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAV3P56539 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.11■□□□□ 0.33
CAV3P56539 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.11■□□□□ 0.33
CAV3P56539 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAV3P56539 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CAV3P56539 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CAV3P56539 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAV3P56539 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAV3P56539 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAV3P56539 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.11■□□□□ 0.33
CAV3P56539 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAV3P56539 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.11■□□□□ 0.33
CAV3P56539 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.11■□□□□ 0.33
CAV3P56539 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.11■□□□□ 0.33
CAV3P56539 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.11■□□□□ 0.33
CAV3P56539 AC005181.1-201ENST00000604782 1256 ntBASIC17.11■□□□□ 0.33
CAV3P56539 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAV3P56539 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAV3P56539 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAV3P56539 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAV3P56539 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAV3P56539 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAV3P56539 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAV3P56539 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAV3P56539 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CAV3P56539 FP475955.4-201ENST00000623131 1990 ntBASIC17.11■□□□□ 0.33
CAV3P56539 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAV3P56539 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.11■□□□□ 0.33
CAV3P56539 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAV3P56539 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAV3P56539 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.11■□□□□ 0.33
CAV3P56539 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAV3P56539 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CAV3P56539 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CAV3P56539 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.1■□□□□ 0.33
CAV3P56539 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAV3P56539 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms