Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CDH12P55289 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH12P55289 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH12P55289 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH12P55289 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDH12P55289 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH12P55289 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH12P55289 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH12P55289 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH12P55289 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDH12P55289 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH12P55289 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH12P55289 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH12P55289 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH12P55289 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CDH12P55289 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH12P55289 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH12P55289 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CDH12P55289 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH12P55289 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH12P55289 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH12P55289 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.91■□□□□ 0.46
CDH12P55289 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH12P55289 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CDH12P55289 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH12P55289 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH12P55289 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH12P55289 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.91■□□□□ 0.46
CDH12P55289 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH12P55289 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.91■□□□□ 0.46
CDH12P55289 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CDH12P55289 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH12P55289 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH12P55289 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
CDH12P55289 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH12P55289 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH12P55289 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH12P55289 TFP1-202ENST00000475455 1573 ntBASIC17.91■□□□□ 0.46
CDH12P55289 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
CDH12P55289 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH12P55289 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH12P55289 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH12P55289 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH12P55289 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CDH12P55289 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH12P55289 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH12P55289 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH12P55289 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.9■□□□□ 0.46
CDH12P55289 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH12P55289 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.9■□□□□ 0.46
CDH12P55289 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH12P55289 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.9■□□□□ 0.46
CDH12P55289 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.9■□□□□ 0.46
CDH12P55289 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.9■□□□□ 0.46
CDH12P55289 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH12P55289 AC006557.6-201ENST00000623071 864 ntBASIC17.9■□□□□ 0.46
CDH12P55289 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.9■□□□□ 0.46
CDH12P55289 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CDH12P55289 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH12P55289 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH12P55289 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH12P55289 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH12P55289 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CDH12P55289 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH12P55289 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CDH12P55289 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CDH12P55289 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH12P55289 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH12P55289 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH12P55289 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH12P55289 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH12P55289 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH12P55289 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH12P55289 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CDH12P55289 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.89■□□□□ 0.45
CDH12P55289 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH12P55289 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.89■□□□□ 0.45
CDH12P55289 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.89■□□□□ 0.45
CDH12P55289 MIR4758-201ENST00000577688 71 ntBASIC17.89■□□□□ 0.45
CDH12P55289 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH12P55289 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CDH12P55289 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH12P55289 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH12P55289 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH12P55289 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH12P55289 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH12P55289 ZNF815P-204ENST00000434898 1737 ntBASIC17.89■□□□□ 0.45
CDH12P55289 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH12P55289 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH12P55289 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CDH12P55289 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH12P55289 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH12P55289 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH12P55289 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH12P55289 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH12P55289 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH12P55289 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH12P55289 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.88■□□□□ 0.45
CDH12P55289 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CDH12P55289 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms