Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 ANO7L1-203ENST00000602586 1720 ntBASIC17.56■□□□□ 0.4
HMGA2P52926 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGA2P52926 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGA2P52926 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HMGA2P52926 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMGA2P52926 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGA2P52926 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMGA2P52926 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMGA2P52926 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.56■□□□□ 0.4
HMGA2P52926 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.56■□□□□ 0.4
HMGA2P52926 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGA2P52926 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMGA2P52926 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.56■□□□□ 0.4
HMGA2P52926 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.56■□□□□ 0.4
HMGA2P52926 AL121906.2-201ENST00000621597 723 ntBASIC17.56■□□□□ 0.4
HMGA2P52926 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.56■□□□□ 0.4
HMGA2P52926 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.56■□□□□ 0.4
HMGA2P52926 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMGA2P52926 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGA2P52926 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGA2P52926 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGA2P52926 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMGA2P52926 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.56■□□□□ 0.4
HMGA2P52926 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGA2P52926 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGA2P52926 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGA2P52926 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HMGA2P52926 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HMGA2P52926 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGA2P52926 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGA2P52926 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGA2P52926 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGA2P52926 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
HMGA2P52926 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.55■□□□□ 0.4
HMGA2P52926 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGA2P52926 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HMGA2P52926 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.55■□□□□ 0.4
HMGA2P52926 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGA2P52926 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HMGA2P52926 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGA2P52926 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGA2P52926 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGA2P52926 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.55■□□□□ 0.4
HMGA2P52926 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
HMGA2P52926 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HMGA2P52926 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.55■□□□□ 0.4
HMGA2P52926 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.55■□□□□ 0.4
HMGA2P52926 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.55■□□□□ 0.4
HMGA2P52926 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.55■□□□□ 0.4
HMGA2P52926 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.55■□□□□ 0.4
HMGA2P52926 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.55■□□□□ 0.4
HMGA2P52926 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGA2P52926 AL050303.2-201ENST00000619798 666 ntBASIC17.55■□□□□ 0.4
HMGA2P52926 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGA2P52926 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGA2P52926 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.55■□□□□ 0.4
HMGA2P52926 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGA2P52926 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HMGA2P52926 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGA2P52926 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.55■□□□□ 0.4
HMGA2P52926 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HMGA2P52926 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.55■□□□□ 0.4
HMGA2P52926 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.55■□□□□ 0.4
HMGA2P52926 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGA2P52926 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.55■□□□□ 0.4
HMGA2P52926 NOC2LP2-201ENST00000407594 1944 ntBASIC17.55■□□□□ 0.4
HMGA2P52926 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGA2P52926 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGA2P52926 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.54■□□□□ 0.4
HMGA2P52926 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.54■□□□□ 0.4
HMGA2P52926 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGA2P52926 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGA2P52926 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGA2P52926 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.54■□□□□ 0.4
HMGA2P52926 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.54■□□□□ 0.4
HMGA2P52926 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGA2P52926 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.54■□□□□ 0.4
HMGA2P52926 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.54■□□□□ 0.4
HMGA2P52926 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGA2P52926 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGA2P52926 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGA2P52926 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGA2P52926 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HMGA2P52926 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
HMGA2P52926 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGA2P52926 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGA2P52926 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGA2P52926 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGA2P52926 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGA2P52926 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGA2P52926 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGA2P52926 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGA2P52926 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HMGA2P52926 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGA2P52926 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGA2P52926 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGA2P52926 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGA2P52926 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGA2P52926 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGA2P52926 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms