Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.76■□□□□ 0.91
PDE6CP51160 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.76■□□□□ 0.91
PDE6CP51160 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PDE6CP51160 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDE6CP51160 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDE6CP51160 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDE6CP51160 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDE6CP51160 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.76■□□□□ 0.91
PDE6CP51160 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.76■□□□□ 0.91
PDE6CP51160 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDE6CP51160 KRT18P16-201ENST00000510337 1294 ntBASIC20.76■□□□□ 0.91
PDE6CP51160 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.76■□□□□ 0.91
PDE6CP51160 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.76■□□□□ 0.91
PDE6CP51160 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDE6CP51160 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDE6CP51160 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDE6CP51160 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.75■□□□□ 0.91
PDE6CP51160 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.75■□□□□ 0.91
PDE6CP51160 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PDE6CP51160 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6CP51160 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6CP51160 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6CP51160 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6CP51160 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PDE6CP51160 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6CP51160 TUBB8P6-201ENST00000436895 1288 ntBASIC20.75■□□□□ 0.91
PDE6CP51160 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PDE6CP51160 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.75■□□□□ 0.91
PDE6CP51160 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.75■□□□□ 0.91
PDE6CP51160 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6CP51160 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.75■□□□□ 0.91
PDE6CP51160 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6CP51160 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6CP51160 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6CP51160 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.75■□□□□ 0.91
PDE6CP51160 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6CP51160 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.75■□□□□ 0.91
PDE6CP51160 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6CP51160 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.75■□□□□ 0.91
PDE6CP51160 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.75■□□□□ 0.91
PDE6CP51160 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6CP51160 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6CP51160 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6CP51160 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6CP51160 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6CP51160 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6CP51160 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
PDE6CP51160 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6CP51160 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6CP51160 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6CP51160 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6CP51160 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PDE6CP51160 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6CP51160 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PDE6CP51160 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6CP51160 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6CP51160 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.74■□□□□ 0.91
PDE6CP51160 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
PDE6CP51160 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6CP51160 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6CP51160 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6CP51160 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6CP51160 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.74■□□□□ 0.91
PDE6CP51160 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.74■□□□□ 0.91
PDE6CP51160 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.74■□□□□ 0.91
PDE6CP51160 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.74■□□□□ 0.91
PDE6CP51160 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PDE6CP51160 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PDE6CP51160 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6CP51160 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.74■□□□□ 0.91
PDE6CP51160 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.74■□□□□ 0.91
PDE6CP51160 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6CP51160 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6CP51160 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6CP51160 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6CP51160 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6CP51160 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6CP51160 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
PDE6CP51160 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6CP51160 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.73■□□□□ 0.91
PDE6CP51160 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6CP51160 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6CP51160 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.73■□□□□ 0.91
PDE6CP51160 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6CP51160 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.73■□□□□ 0.91
PDE6CP51160 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.73■□□□□ 0.91
PDE6CP51160 AC073912.3-201ENST00000624414 853 ntBASIC20.73■□□□□ 0.91
PDE6CP51160 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6CP51160 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6CP51160 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6CP51160 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
PDE6CP51160 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PDE6CP51160 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6CP51160 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6CP51160 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6CP51160 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6CP51160 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6CP51160 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6CP51160 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6CP51160 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms