Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TUBP50607 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.25■□□□□ 0.83
TUBP50607 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBP50607 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBP50607 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBP50607 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TUBP50607 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBP50607 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TUBP50607 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBP50607 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBP50607 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TUBP50607 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBP50607 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBP50607 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TUBP50607 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
TUBP50607 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TUBP50607 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBP50607 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.24■□□□□ 0.83
TUBP50607 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.24■□□□□ 0.83
TUBP50607 Z85996.1-201ENST00000494644 937 ntBASIC20.24■□□□□ 0.83
TUBP50607 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.24■□□□□ 0.83
TUBP50607 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.24■□□□□ 0.83
TUBP50607 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.24■□□□□ 0.83
TUBP50607 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBP50607 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TUBP50607 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBP50607 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBP50607 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBP50607 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TUBP50607 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
TUBP50607 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TUBP50607 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.24■□□□□ 0.83
TUBP50607 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TUBP50607 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBP50607 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBP50607 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TUBP50607 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.23■□□□□ 0.83
TUBP50607 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBP50607 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBP50607 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TUBP50607 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TUBP50607 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBP50607 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.23■□□□□ 0.83
TUBP50607 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBP50607 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBP50607 AC004951.3-201ENST00000418645 1148 ntBASIC20.23■□□□□ 0.83
TUBP50607 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.23■□□□□ 0.83
TUBP50607 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBP50607 AL160286.2-201ENST00000567150 934 ntBASIC20.23■□□□□ 0.83
TUBP50607 AC145285.6-201ENST00000604632 637 ntBASIC20.23■□□□□ 0.83
TUBP50607 AP000692.2-201ENST00000608391 879 ntBASIC20.23■□□□□ 0.83
TUBP50607 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBP50607 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBP50607 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBP50607 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBP50607 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.22■□□□□ 0.83
TUBP50607 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TUBP50607 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.22■□□□□ 0.83
TUBP50607 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBP50607 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.22■□□□□ 0.83
TUBP50607 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBP50607 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.22■□□□□ 0.83
TUBP50607 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.22■□□□□ 0.83
TUBP50607 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.22■□□□□ 0.83
TUBP50607 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.22■□□□□ 0.83
TUBP50607 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.22■□□□□ 0.83
TUBP50607 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TUBP50607 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBP50607 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBP50607 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBP50607 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TUBP50607 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBP50607 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBP50607 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.22■□□□□ 0.83
TUBP50607 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBP50607 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBP50607 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.21■□□□□ 0.83
TUBP50607 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TUBP50607 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBP50607 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.21■□□□□ 0.83
TUBP50607 KRT8P9-201ENST00000558927 1449 ntBASIC20.21■□□□□ 0.83
TUBP50607 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBP50607 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBP50607 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBP50607 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBP50607 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBP50607 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBP50607 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBP50607 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.21■□□□□ 0.83
TUBP50607 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.21■□□□□ 0.83
TUBP50607 NAPSB-206ENST00000562112 1266 ntBASIC20.21■□□□□ 0.83
TUBP50607 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
TUBP50607 AC011298.2-201ENST00000617989 482 ntBASIC20.21■□□□□ 0.83
TUBP50607 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.21■□□□□ 0.83
TUBP50607 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
TUBP50607 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.21■□□□□ 0.83
TUBP50607 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.21■□□□□ 0.83
TUBP50607 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBP50607 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.21■□□□□ 0.83
TUBP50607 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms