Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPAP49450 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPAP49450 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CENPAP49450 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPAP49450 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPAP49450 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPAP49450 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPAP49450 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPAP49450 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CENPAP49450 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPAP49450 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CENPAP49450 AL032819.2-201ENST00000624543 2162 ntBASIC17.41■□□□□ 0.38
CENPAP49450 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPAP49450 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CENPAP49450 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.41■□□□□ 0.38
CENPAP49450 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.41■□□□□ 0.38
CENPAP49450 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.41■□□□□ 0.38
CENPAP49450 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CENPAP49450 AC005829.2-201ENST00000571422 1056 ntBASIC17.41■□□□□ 0.38
CENPAP49450 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CENPAP49450 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPAP49450 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPAP49450 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPAP49450 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.4■□□□□ 0.38
CENPAP49450 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPAP49450 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.4■□□□□ 0.38
CENPAP49450 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPAP49450 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPAP49450 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPAP49450 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CENPAP49450 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.4■□□□□ 0.38
CENPAP49450 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CENPAP49450 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CENPAP49450 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.4■□□□□ 0.38
CENPAP49450 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPAP49450 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CENPAP49450 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CENPAP49450 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPAP49450 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.4■□□□□ 0.38
CENPAP49450 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.4■□□□□ 0.38
CENPAP49450 AC097658.1-201ENST00000475555 843 ntBASIC17.4■□□□□ 0.38
CENPAP49450 AC091874.3-201ENST00000512672 1195 ntBASIC17.4■□□□□ 0.38
CENPAP49450 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.4■□□□□ 0.38
CENPAP49450 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.4■□□□□ 0.38
CENPAP49450 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.4■□□□□ 0.38
CENPAP49450 MIR4758-201ENST00000577688 71 ntBASIC17.4■□□□□ 0.38
CENPAP49450 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.4■□□□□ 0.38
CENPAP49450 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CENPAP49450 AC092118.2-201ENST00000613495 667 ntBASIC17.4■□□□□ 0.38
CENPAP49450 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.4■□□□□ 0.38
CENPAP49450 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.4■□□□□ 0.38
CENPAP49450 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CENPAP49450 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.4■□□□□ 0.38
CENPAP49450 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.4■□□□□ 0.38
CENPAP49450 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CENPAP49450 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CENPAP49450 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CENPAP49450 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPAP49450 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPAP49450 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPAP49450 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CENPAP49450 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CENPAP49450 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CENPAP49450 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CENPAP49450 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
CENPAP49450 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CENPAP49450 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CENPAP49450 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPAP49450 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.39■□□□□ 0.37
CENPAP49450 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CENPAP49450 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.39■□□□□ 0.37
CENPAP49450 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CENPAP49450 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.39■□□□□ 0.37
CENPAP49450 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPAP49450 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPAP49450 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPAP49450 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPAP49450 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CENPAP49450 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.39■□□□□ 0.37
CENPAP49450 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.39■□□□□ 0.37
CENPAP49450 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.39■□□□□ 0.37
CENPAP49450 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.39■□□□□ 0.37
CENPAP49450 AC092666.2-201ENST00000613287 246 ntBASIC17.39■□□□□ 0.37
CENPAP49450 AC124283.5-201ENST00000624661 1809 ntBASIC17.39■□□□□ 0.37
CENPAP49450 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPAP49450 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPAP49450 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CENPAP49450 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPAP49450 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPAP49450 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CENPAP49450 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CENPAP49450 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CENPAP49450 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.38■□□□□ 0.37
CENPAP49450 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CENPAP49450 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CENPAP49450 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CENPAP49450 AC092368.3-202ENST00000574180 1591 ntBASIC17.38■□□□□ 0.37
CENPAP49450 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CENPAP49450 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.38■□□□□ 0.37
CENPAP49450 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms