Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA4P43681 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA4P43681 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA4P43681 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA4P43681 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA4P43681 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA4P43681 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNA4P43681 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA4P43681 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA4P43681 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA4P43681 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA4P43681 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNA4P43681 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
CHRNA4P43681 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CHRNA4P43681 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA4P43681 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNA4P43681 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.4■□□□□ 0.7
CHRNA4P43681 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.4■□□□□ 0.7
CHRNA4P43681 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA4P43681 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA4P43681 AP002982.1-201ENST00000492365 877 ntBASIC19.4■□□□□ 0.7
CHRNA4P43681 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.4■□□□□ 0.7
CHRNA4P43681 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.4■□□□□ 0.7
CHRNA4P43681 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNA4P43681 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNA4P43681 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNA4P43681 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CHRNA4P43681 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.4■□□□□ 0.7
CHRNA4P43681 AC120498.9-201ENST00000339021 3867 ntBASIC19.4■□□□□ 0.7
CHRNA4P43681 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA4P43681 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNA4P43681 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CHRNA4P43681 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CHRNA4P43681 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNA4P43681 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CHRNA4P43681 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
CHRNA4P43681 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHRNA4P43681 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CHRNA4P43681 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA4P43681 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA4P43681 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA4P43681 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CHRNA4P43681 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA4P43681 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CHRNA4P43681 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.39■□□□□ 0.69
CHRNA4P43681 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRNA4P43681 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRNA4P43681 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRNA4P43681 RARRES2P10-201ENST00000564312 460 ntBASIC19.39■□□□□ 0.69
CHRNA4P43681 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRNA4P43681 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CHRNA4P43681 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.39■□□□□ 0.69
CHRNA4P43681 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA4P43681 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA4P43681 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA4P43681 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.39■□□□□ 0.69
CHRNA4P43681 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
CHRNA4P43681 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA4P43681 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA4P43681 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA4P43681 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA4P43681 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA4P43681 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA4P43681 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA4P43681 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CHRNA4P43681 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA4P43681 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA4P43681 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.38■□□□□ 0.69
CHRNA4P43681 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.38■□□□□ 0.69
CHRNA4P43681 Z85996.1-201ENST00000494644 937 ntBASIC19.38■□□□□ 0.69
CHRNA4P43681 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA4P43681 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.38■□□□□ 0.69
CHRNA4P43681 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.38■□□□□ 0.69
CHRNA4P43681 AF186192.3-201ENST00000583427 947 ntBASIC19.38■□□□□ 0.69
CHRNA4P43681 AL445675.2-201ENST00000620291 557 ntBASIC19.38■□□□□ 0.69
CHRNA4P43681 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CHRNA4P43681 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CHRNA4P43681 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA4P43681 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CHRNA4P43681 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.37■□□□□ 0.69
CHRNA4P43681 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA4P43681 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.37■□□□□ 0.69
CHRNA4P43681 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.37■□□□□ 0.69
CHRNA4P43681 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.37■□□□□ 0.69
CHRNA4P43681 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA4P43681 KRT8P41-201ENST00000533985 1514 ntBASIC19.37■□□□□ 0.69
CHRNA4P43681 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA4P43681 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA4P43681 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA4P43681 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA4P43681 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA4P43681 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA4P43681 AC004980.1-204ENST00000429707 299 ntBASIC19.37■□□□□ 0.69
CHRNA4P43681 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.37■□□□□ 0.69
CHRNA4P43681 AL353708.3-201ENST00000610272 989 ntBASIC19.37■□□□□ 0.69
CHRNA4P43681 TMEM191A-211ENST00000637163 1067 ntBASIC19.37■□□□□ 0.69
CHRNA4P43681 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA4P43681 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA4P43681 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA4P43681 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms