Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSR1P43307 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.42■□□□□ 0.86
SSR1P43307 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SSR1P43307 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.42■□□□□ 0.86
SSR1P43307 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SSR1P43307 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SSR1P43307 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
SSR1P43307 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SSR1P43307 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.41■□□□□ 0.86
SSR1P43307 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSR1P43307 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.41■□□□□ 0.86
SSR1P43307 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SSR1P43307 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.41■□□□□ 0.86
SSR1P43307 HLA-L-209ENST00000420110 1011 ntBASIC20.41■□□□□ 0.86
SSR1P43307 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.41■□□□□ 0.86
SSR1P43307 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SSR1P43307 AC120498.8-201ENST00000614275 531 ntBASIC20.41■□□□□ 0.86
SSR1P43307 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.41■□□□□ 0.86
SSR1P43307 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSR1P43307 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSR1P43307 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SSR1P43307 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSR1P43307 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SSR1P43307 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SSR1P43307 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.41■□□□□ 0.86
SSR1P43307 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SSR1P43307 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSR1P43307 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SSR1P43307 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SSR1P43307 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SSR1P43307 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSR1P43307 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSR1P43307 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSR1P43307 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSR1P43307 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSR1P43307 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSR1P43307 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSR1P43307 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.4■□□□□ 0.86
SSR1P43307 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SSR1P43307 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSR1P43307 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSR1P43307 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SSR1P43307 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SSR1P43307 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.4■□□□□ 0.86
SSR1P43307 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SSR1P43307 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SSR1P43307 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.4■□□□□ 0.86
SSR1P43307 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.4■□□□□ 0.86
SSR1P43307 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.4■□□□□ 0.86
SSR1P43307 AC008687.6-201ENST00000596318 630 ntBASIC20.4■□□□□ 0.86
SSR1P43307 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SSR1P43307 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SSR1P43307 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.39■□□□□ 0.86
SSR1P43307 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SSR1P43307 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SSR1P43307 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.39■□□□□ 0.86
SSR1P43307 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SSR1P43307 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SSR1P43307 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.39■□□□□ 0.85
SSR1P43307 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SSR1P43307 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SSR1P43307 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SSR1P43307 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.39■□□□□ 0.85
SSR1P43307 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.39■□□□□ 0.85
SSR1P43307 AC142086.2-201ENST00000569753 217 ntBASIC20.39■□□□□ 0.85
SSR1P43307 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SSR1P43307 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SSR1P43307 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SSR1P43307 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SSR1P43307 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.39■□□□□ 0.85
SSR1P43307 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SSR1P43307 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SSR1P43307 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.39■□□□□ 0.85
SSR1P43307 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SSR1P43307 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSR1P43307 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSR1P43307 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SSR1P43307 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.38■□□□□ 0.85
SSR1P43307 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
SSR1P43307 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SSR1P43307 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.38■□□□□ 0.85
SSR1P43307 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSR1P43307 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SSR1P43307 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.38■□□□□ 0.85
SSR1P43307 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.38■□□□□ 0.85
SSR1P43307 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.38■□□□□ 0.85
SSR1P43307 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SSR1P43307 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSR1P43307 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SSR1P43307 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSR1P43307 BX323043.1-201ENST00000641006 1765 ntBASIC20.38■□□□□ 0.85
SSR1P43307 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SSR1P43307 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSR1P43307 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.38■□□□□ 0.85
SSR1P43307 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.38■□□□□ 0.85
SSR1P43307 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.37■□□□□ 0.85
SSR1P43307 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSR1P43307 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSR1P43307 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSR1P43307 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms