Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RFC5P40937 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.24■□□□□ 0.99
RFC5P40937 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.24■□□□□ 0.99
RFC5P40937 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RFC5P40937 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.24■□□□□ 0.99
RFC5P40937 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFC5P40937 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFC5P40937 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RFC5P40937 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFC5P40937 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFC5P40937 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.24■□□□□ 0.99
RFC5P40937 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.24■□□□□ 0.99
RFC5P40937 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFC5P40937 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFC5P40937 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC5P40937 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.23■□□□□ 0.99
RFC5P40937 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.23■□□□□ 0.99
RFC5P40937 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RFC5P40937 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC5P40937 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RFC5P40937 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC5P40937 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC5P40937 CCR12P-201ENST00000446203 998 ntBASIC21.23■□□□□ 0.99
RFC5P40937 CA15P1-201ENST00000481698 905 ntBASIC21.23■□□□□ 0.99
RFC5P40937 AC128688.1-201ENST00000487626 519 ntBASIC21.23■□□□□ 0.99
RFC5P40937 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.23■□□□□ 0.99
RFC5P40937 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.23■□□□□ 0.99
RFC5P40937 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC5P40937 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.23■□□□□ 0.99
RFC5P40937 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RFC5P40937 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.23■□□□□ 0.99
RFC5P40937 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RFC5P40937 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RFC5P40937 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC5P40937 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RFC5P40937 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RFC5P40937 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RFC5P40937 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RFC5P40937 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.22■□□□□ 0.99
RFC5P40937 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RFC5P40937 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.22■□□□□ 0.99
RFC5P40937 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RFC5P40937 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.22■□□□□ 0.99
RFC5P40937 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.22■□□□□ 0.99
RFC5P40937 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC5P40937 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RFC5P40937 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC5P40937 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC5P40937 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC5P40937 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.22■□□□□ 0.99
RFC5P40937 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC5P40937 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.22■□□□□ 0.99
RFC5P40937 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.22■□□□□ 0.99
RFC5P40937 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC5P40937 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC5P40937 TSPY23P-201ENST00000440136 739 ntBASIC21.22■□□□□ 0.99
RFC5P40937 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
RFC5P40937 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.22■□□□□ 0.99
RFC5P40937 AC005363.2-201ENST00000618631 242 ntBASIC21.22■□□□□ 0.99
RFC5P40937 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
RFC5P40937 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.22■□□□□ 0.99
RFC5P40937 AC116562.4-202ENST00000641738 218 ntBASIC21.22■□□□□ 0.99
RFC5P40937 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC5P40937 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.22■□□□□ 0.99
RFC5P40937 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC5P40937 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC5P40937 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC5P40937 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC5P40937 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
RFC5P40937 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC5P40937 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC5P40937 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.22■□□□□ 0.99
RFC5P40937 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC5P40937 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC5P40937 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFC5P40937 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFC5P40937 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFC5P40937 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFC5P40937 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.21■□□□□ 0.99
RFC5P40937 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.21■□□□□ 0.99
RFC5P40937 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.21■□□□□ 0.99
RFC5P40937 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.21■□□□□ 0.99
RFC5P40937 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.21■□□□□ 0.99
RFC5P40937 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFC5P40937 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.21■□□□□ 0.99
RFC5P40937 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFC5P40937 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
RFC5P40937 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFC5P40937 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RFC5P40937 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.2■□□□□ 0.98
RFC5P40937 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFC5P40937 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFC5P40937 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFC5P40937 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.2■□□□□ 0.98
RFC5P40937 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFC5P40937 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.2■□□□□ 0.98
RFC5P40937 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFC5P40937 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.2■□□□□ 0.98
RFC5P40937 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFC5P40937 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms