Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SOX11P35716 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX11P35716 AL032819.2-201ENST00000624543 2162 ntBASIC18.75■□□□□ 0.59
SOX11P35716 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.75■□□□□ 0.59
SOX11P35716 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX11P35716 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX11P35716 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SOX11P35716 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.75■□□□□ 0.59
SOX11P35716 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX11P35716 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX11P35716 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SOX11P35716 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.75■□□□□ 0.59
SOX11P35716 RPS2P4-201ENST00000476944 856 ntBASIC18.75■□□□□ 0.59
SOX11P35716 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX11P35716 C1QBPP2-201ENST00000528754 825 ntBASIC18.75■□□□□ 0.59
SOX11P35716 AC005829.2-201ENST00000571422 1056 ntBASIC18.75■□□□□ 0.59
SOX11P35716 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SOX11P35716 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX11P35716 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX11P35716 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.75■□□□□ 0.59
SOX11P35716 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX11P35716 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX11P35716 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SOX11P35716 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX11P35716 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SOX11P35716 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SOX11P35716 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SOX11P35716 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX11P35716 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX11P35716 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.74■□□□□ 0.59
SOX11P35716 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SOX11P35716 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.74■□□□□ 0.59
SOX11P35716 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX11P35716 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX11P35716 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX11P35716 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.74■□□□□ 0.59
SOX11P35716 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX11P35716 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX11P35716 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.74■□□□□ 0.59
SOX11P35716 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX11P35716 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX11P35716 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX11P35716 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SOX11P35716 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX11P35716 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX11P35716 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX11P35716 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.74■□□□□ 0.59
SOX11P35716 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SOX11P35716 AC008550.1-201ENST00000511500 884 ntBASIC18.74■□□□□ 0.59
SOX11P35716 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX11P35716 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.74■□□□□ 0.59
SOX11P35716 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.74■□□□□ 0.59
SOX11P35716 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.74■□□□□ 0.59
SOX11P35716 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX11P35716 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX11P35716 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.74■□□□□ 0.59
SOX11P35716 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SOX11P35716 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX11P35716 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX11P35716 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX11P35716 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.73■□□□□ 0.59
SOX11P35716 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SOX11P35716 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX11P35716 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX11P35716 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX11P35716 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX11P35716 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX11P35716 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.73■□□□□ 0.59
SOX11P35716 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SOX11P35716 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.73■□□□□ 0.59
SOX11P35716 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SOX11P35716 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX11P35716 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
SOX11P35716 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SOX11P35716 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.73■□□□□ 0.59
SOX11P35716 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SOX11P35716 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SOX11P35716 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
SOX11P35716 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX11P35716 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.72■□□□□ 0.59
SOX11P35716 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SOX11P35716 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX11P35716 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX11P35716 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.72■□□□□ 0.59
SOX11P35716 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.72■□□□□ 0.59
SOX11P35716 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX11P35716 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SOX11P35716 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX11P35716 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SOX11P35716 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX11P35716 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SOX11P35716 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.72■□□□□ 0.59
SOX11P35716 AL596275.1-201ENST00000423464 877 ntBASIC18.72■□□□□ 0.59
SOX11P35716 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.72■□□□□ 0.59
SOX11P35716 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.72■□□□□ 0.59
SOX11P35716 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
SOX11P35716 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SOX11P35716 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
SOX11P35716 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SOX11P35716 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms