Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.34■□□□□ 0.37
APEX1P27695 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
APEX1P27695 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APEX1P27695 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APEX1P27695 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APEX1P27695 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APEX1P27695 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APEX1P27695 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
APEX1P27695 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
APEX1P27695 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APEX1P27695 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
APEX1P27695 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.33■□□□□ 0.37
APEX1P27695 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
APEX1P27695 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.33■□□□□ 0.37
APEX1P27695 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
APEX1P27695 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.33■□□□□ 0.37
APEX1P27695 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
APEX1P27695 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
APEX1P27695 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
APEX1P27695 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
APEX1P27695 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
APEX1P27695 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.33■□□□□ 0.36
APEX1P27695 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.33■□□□□ 0.36
APEX1P27695 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.33■□□□□ 0.36
APEX1P27695 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.33■□□□□ 0.36
APEX1P27695 AC008687.6-201ENST00000596318 630 ntBASIC17.33■□□□□ 0.36
APEX1P27695 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
APEX1P27695 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
APEX1P27695 PCDHB18P-201ENST00000524813 2368 ntBASIC17.33■□□□□ 0.36
APEX1P27695 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
APEX1P27695 CROCCP3-202ENST00000420820 1947 ntBASIC17.33■□□□□ 0.36
APEX1P27695 AL133373.2-201ENST00000623187 2828 ntBASIC17.33■□□□□ 0.36
APEX1P27695 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
APEX1P27695 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APEX1P27695 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
APEX1P27695 AC009113.1-201ENST00000570267 2443 ntBASIC17.32■□□□□ 0.36
APEX1P27695 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
APEX1P27695 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APEX1P27695 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
APEX1P27695 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APEX1P27695 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.32■□□□□ 0.36
APEX1P27695 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APEX1P27695 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
APEX1P27695 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
APEX1P27695 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
APEX1P27695 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
APEX1P27695 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
APEX1P27695 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.32■□□□□ 0.36
APEX1P27695 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.32■□□□□ 0.36
APEX1P27695 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.32■□□□□ 0.36
APEX1P27695 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.32■□□□□ 0.36
APEX1P27695 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APEX1P27695 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.32■□□□□ 0.36
APEX1P27695 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.32■□□□□ 0.36
APEX1P27695 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.32■□□□□ 0.36
APEX1P27695 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
APEX1P27695 SOX15-203ENST00000570788 1093 ntBASIC17.32■□□□□ 0.36
APEX1P27695 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
APEX1P27695 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
APEX1P27695 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.32■□□□□ 0.36
APEX1P27695 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
APEX1P27695 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APEX1P27695 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APEX1P27695 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
APEX1P27695 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APEX1P27695 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
APEX1P27695 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.32■□□□□ 0.36
APEX1P27695 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APEX1P27695 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
APEX1P27695 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
APEX1P27695 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
APEX1P27695 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
APEX1P27695 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
APEX1P27695 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
APEX1P27695 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
APEX1P27695 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
APEX1P27695 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
APEX1P27695 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
APEX1P27695 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
APEX1P27695 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
APEX1P27695 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
APEX1P27695 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
APEX1P27695 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
APEX1P27695 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
APEX1P27695 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
APEX1P27695 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.31■□□□□ 0.36
APEX1P27695 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
APEX1P27695 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
APEX1P27695 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
APEX1P27695 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.31■□□□□ 0.36
APEX1P27695 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
APEX1P27695 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
APEX1P27695 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
APEX1P27695 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.31■□□□□ 0.36
APEX1P27695 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.31■□□□□ 0.36
APEX1P27695 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.31■□□□□ 0.36
APEX1P27695 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.31■□□□□ 0.36
APEX1P27695 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
APEX1P27695 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.31■□□□□ 0.36
APEX1P27695 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms