Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
XPAP23025 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
XPAP23025 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.41■□□□□ 0.7
XPAP23025 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
XPAP23025 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
XPAP23025 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
XPAP23025 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
XPAP23025 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
XPAP23025 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.41■□□□□ 0.7
XPAP23025 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.41■□□□□ 0.7
XPAP23025 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.41■□□□□ 0.7
XPAP23025 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
XPAP23025 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
XPAP23025 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
XPAP23025 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
XPAP23025 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
XPAP23025 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
XPAP23025 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
XPAP23025 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
XPAP23025 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.41■□□□□ 0.7
XPAP23025 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
XPAP23025 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
XPAP23025 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.41■□□□□ 0.7
XPAP23025 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.41■□□□□ 0.7
XPAP23025 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.41■□□□□ 0.7
XPAP23025 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.41■□□□□ 0.7
XPAP23025 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
XPAP23025 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.4■□□□□ 0.7
XPAP23025 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
XPAP23025 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
XPAP23025 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.4■□□□□ 0.7
XPAP23025 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
XPAP23025 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
XPAP23025 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
XPAP23025 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
XPAP23025 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.4■□□□□ 0.7
XPAP23025 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
XPAP23025 FAM207BP-201ENST00000447172 505 ntBASIC19.4■□□□□ 0.7
XPAP23025 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.4■□□□□ 0.7
XPAP23025 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.4■□□□□ 0.7
XPAP23025 SLC25A1P4-201ENST00000567977 778 ntBASIC19.4■□□□□ 0.7
XPAP23025 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
XPAP23025 DGCR10-201ENST00000609839 495 ntBASIC19.4■□□□□ 0.7
XPAP23025 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
XPAP23025 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.4■□□□□ 0.7
XPAP23025 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
XPAP23025 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
XPAP23025 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.4■□□□□ 0.7
XPAP23025 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.4■□□□□ 0.7
XPAP23025 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.4■□□□□ 0.7
XPAP23025 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
XPAP23025 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
XPAP23025 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
XPAP23025 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.39■□□□□ 0.7
XPAP23025 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
XPAP23025 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
XPAP23025 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.39■□□□□ 0.69
XPAP23025 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.39■□□□□ 0.69
XPAP23025 AC097488.1-201ENST00000507834 756 ntBASIC19.39■□□□□ 0.69
XPAP23025 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.39■□□□□ 0.69
XPAP23025 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.39■□□□□ 0.69
XPAP23025 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.39■□□□□ 0.69
XPAP23025 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.39■□□□□ 0.69
XPAP23025 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
XPAP23025 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
XPAP23025 AC079598.2-202ENST00000546624 1451 ntBASIC19.39■□□□□ 0.69
XPAP23025 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
XPAP23025 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
XPAP23025 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
XPAP23025 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
XPAP23025 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.39■□□□□ 0.69
XPAP23025 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
XPAP23025 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
XPAP23025 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XPAP23025 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XPAP23025 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
XPAP23025 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
XPAP23025 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
XPAP23025 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
XPAP23025 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.38■□□□□ 0.69
XPAP23025 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.38■□□□□ 0.69
XPAP23025 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XPAP23025 AC087499.1-201ENST00000418141 1075 ntBASIC19.38■□□□□ 0.69
XPAP23025 CRYGFP-201ENST00000418459 633 ntBASIC19.38■□□□□ 0.69
XPAP23025 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
XPAP23025 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
XPAP23025 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.38■□□□□ 0.69
XPAP23025 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.38■□□□□ 0.69
XPAP23025 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
XPAP23025 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
XPAP23025 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
XPAP23025 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.38■□□□□ 0.69
XPAP23025 AC130371.2-201ENST00000619443 611 ntBASIC19.38■□□□□ 0.69
XPAP23025 AC133561.5-201ENST00000635547 218 ntBASIC19.38■□□□□ 0.69
XPAP23025 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XPAP23025 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XPAP23025 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XPAP23025 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XPAP23025 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
XPAP23025 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms