Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.87■□□□□ 0.45
TNFRSF1BP20333 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFRSF1BP20333 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.86■□□□□ 0.45
TNFRSF1BP20333 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.86■□□□□ 0.45
TNFRSF1BP20333 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TNFRSF1BP20333 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFRSF1BP20333 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFRSF1BP20333 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFRSF1BP20333 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TNFRSF1BP20333 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.86■□□□□ 0.45
TNFRSF1BP20333 AL137784.2-201ENST00000607332 1000 ntBASIC17.86■□□□□ 0.45
TNFRSF1BP20333 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
TNFRSF1BP20333 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TNFRSF1BP20333 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.86■□□□□ 0.45
TNFRSF1BP20333 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TNFRSF1BP20333 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
TNFRSF1BP20333 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.86■□□□□ 0.45
TNFRSF1BP20333 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFRSF1BP20333 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TNFRSF1BP20333 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.86■□□□□ 0.45
TNFRSF1BP20333 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.86■□□□□ 0.45
TNFRSF1BP20333 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.86■□□□□ 0.45
TNFRSF1BP20333 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TNFRSF1BP20333 WIZP1-201ENST00000531444 2299 ntBASIC17.86■□□□□ 0.45
TNFRSF1BP20333 AC018470.1-201ENST00000624790 3129 ntBASIC17.85■□□□□ 0.45
TNFRSF1BP20333 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF1BP20333 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF1BP20333 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF1BP20333 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF1BP20333 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF1BP20333 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF1BP20333 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.85■□□□□ 0.45
TNFRSF1BP20333 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.85■□□□□ 0.45
TNFRSF1BP20333 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF1BP20333 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.85■□□□□ 0.45
TNFRSF1BP20333 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.85■□□□□ 0.45
TNFRSF1BP20333 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.85■□□□□ 0.45
TNFRSF1BP20333 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF1BP20333 AC083906.2-201ENST00000511578 360 ntBASIC17.85■□□□□ 0.45
TNFRSF1BP20333 AC091874.3-201ENST00000512672 1195 ntBASIC17.85■□□□□ 0.45
TNFRSF1BP20333 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.85■□□□□ 0.45
TNFRSF1BP20333 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.85■□□□□ 0.45
TNFRSF1BP20333 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.85■□□□□ 0.45
TNFRSF1BP20333 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.85■□□□□ 0.45
TNFRSF1BP20333 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.85■□□□□ 0.45
TNFRSF1BP20333 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF1BP20333 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF1BP20333 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF1BP20333 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 IRX1P1-201ENST00000438849 1838 ntBASIC17.84■□□□□ 0.45
TNFRSF1BP20333 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF1BP20333 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNFRSF1BP20333 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TNFRSF1BP20333 AP006587.1-201ENST00000534129 1502 ntBASIC17.83■□□□□ 0.45
TNFRSF1BP20333 AC026471.1-201ENST00000564629 3026 ntBASIC17.83■□□□□ 0.45
TNFRSF1BP20333 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNFRSF1BP20333 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TNFRSF1BP20333 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.83■□□□□ 0.45
TNFRSF1BP20333 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNFRSF1BP20333 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNFRSF1BP20333 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
TNFRSF1BP20333 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TNFRSF1BP20333 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF1BP20333 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.83■□□□□ 0.44
TNFRSF1BP20333 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.83■□□□□ 0.44
TNFRSF1BP20333 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TNFRSF1BP20333 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF1BP20333 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms